Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 AC083849.1-201ENST00000615227 514 ntBASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 AC116407.4-201ENST00000623319 1061 ntBASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 RASA4DP-201ENST00000460726 1199 ntBASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 HYMAI.1-201ENST00000620949 238 ntBASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.78■□□□□ 0.6
TBC1D3FA6NER0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TBC1D3FA6NER0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TBC1D3FA6NER0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TBC1D3FA6NER0 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.77■□□□□ 0.59
TBC1D3FA6NER0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TBC1D3FA6NER0 AL158211.5-201ENST00000623583 2518 ntBASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 KRT18P56-201ENST00000507275 550 ntBASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3FA6NER0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms