Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRBV6-4A0A1B0GX49 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 HEIH-201ENST00000623091 1652 ntBASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 FSCN1P1-201ENST00000568912 1481 ntBASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 FAM207BP-201ENST00000447172 505 ntBASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 AP001412.1-201ENST00000608405 714 ntBASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 ANO7L1-203ENST00000602586 1720 ntBASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRBV6-4A0A1B0GX49 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 CKBP1-201ENST00000565489 1086 ntBASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 AC130371.2-201ENST00000619443 611 ntBASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-4A0A1B0GX49 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms