Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 MKRN4P-201ENST00000444706 1521 ntBASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 AC104417.2-201ENST00000562989 1793 ntBASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-1A0A0B4J241 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 AP006587.1-201ENST00000534129 1502 ntBASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 BX276092.2-201ENST00000417668 665 ntBASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 AC124283.5-201ENST00000624661 1809 ntBASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAV13-1A0A0B4J241 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRAV13-1A0A0B4J241 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.15□□□□□ -0.31
TRAV13-1A0A0B4J241 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.15□□□□□ -0.31
TRAV13-1A0A0B4J241 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRAV13-1A0A0B4J241 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 AL512353.2-201ENST00000448759 1962 ntBASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 AC105036.2-201ENST00000569468 176 ntBASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 AC005829.2-201ENST00000571422 1056 ntBASIC13.14□□□□□ -0.31
TRAV13-1A0A0B4J241 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms