Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 KRT8P7-201ENST00000533003 1432 ntBASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC187A0A096LP49 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 DRAXINP1-201ENST00000437611 948 ntBASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 LINC00265-3P-201ENST00000447588 903 ntBASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 LINC01711-201ENST00000598340 967 ntBASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 AL121772.3-201ENST00000610840 674 ntBASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC187A0A096LP49 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 TCF3P1-201ENST00000423021 1937 ntBASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 TSPY19P-201ENST00000418461 509 ntBASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 TSPY18P-201ENST00000441642 509 ntBASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 AP000867.3-201ENST00000524675 377 ntBASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 TPSP2-201ENST00000561760 610 ntBASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC187A0A096LP49 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC187A0A096LP49 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC187A0A096LP49 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC187A0A096LP49 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CCDC187A0A096LP49 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC187A0A096LP49 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC187A0A096LP49 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CCDC187A0A096LP49 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 KRT18P23-201ENST00000435622 1283 ntBASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 AC012615.1-201ENST00000565797 1299 ntBASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC187A0A096LP49 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms