Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 RNY1P1-201ENST00000364372 112 ntBASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 SNORD114-6-201ENST00000364393 72 ntBASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 SNORA80E-201ENST00000384744 137 ntBASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 MIR592-201ENST00000384959 97 ntBASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 TRBV12-1-201ENST00000479785 344 ntBASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 AC022137.1-201ENST00000483735 151 ntBASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU6-795P-201ENST00000516323 103 ntBASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 AC104027.1-201ENST00000521887 300 ntBASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 AC078899.2-201ENST00000595282 212 ntBASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 AL355297.2-201ENST00000604792 129 ntBASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 CTSLP2-204ENST00000629029 392 ntBASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 MAPK10-362ENST00000641864 4484 ntBASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
PCDHGC4Q9Y5F7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 Y_RNA.155-201ENST00000363632 101 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 RNA5SP139-201ENST00000364340 117 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU6-644P-201ENST00000391155 98 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 RN7SKP200-201ENST00000410564 320 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU2-63P-201ENST00000410792 194 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 ATP5J2P3-201ENST00000451550 258 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 AL049873.1-201ENST00000480540 376 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 AC023141.11-201ENST00000508864 202 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU2-13P-201ENST00000515909 113 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU6-162P-201ENST00000516228 103 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 SNORD59.2-201ENST00000516873 68 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 MIR3618-201ENST00000580330 88 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 UBL5P2-201ENST00000583788 219 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 AL513534.2-201ENST00000603836 250 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 AC012531.4-201ENST00000616509 177 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 AC073476.4-201ENST00000628409 72 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 MIR1255B1-201ENST00000636325 63 ntBASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHGC4Q9Y5F7 MIR515-2-201ENST00000384883 83 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 MIR515-1-201ENST00000384884 83 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 MIR561-201ENST00000385216 97 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 AL627390.1-201ENST00000396055 340 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 MIR1255A-201ENST00000408338 113 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 AC006539.3-201ENST00000454258 129 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 RPL39P39-201ENST00000455840 151 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 RN7SL442P-201ENST00000473804 320 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU1-143P-201ENST00000516296 146 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 AC024995.1-201ENST00000523014 93 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 MIR5004-201ENST00000579078 107 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 Y_RNA.773-201ENST00000607168 90 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 U1.23-201ENST00000610293 146 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU1-68P-201ENST00000615382 146 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 U7.3-201ENST00000616123 62 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 U1.39-201ENST00000621562 146 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 SNORA50A-202ENST00000629536 136 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 AC093010.3-201ENST00000570269 15214 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 MAPK10-322ENST00000641485 4530 ntBASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGC4Q9Y5F7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 CD24P4-201ENST00000382840 243 ntBASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 MIR577-201ENST00000385196 96 ntBASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU6-972P-201ENST00000391208 107 ntBASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 RNA5SP144-201ENST00000410846 116 ntBASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 AL512326.2-201ENST00000426359 151 ntBASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 RN7SL636P-201ENST00000497504 294 ntBASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 SEM1P1-201ENST00000506694 209 ntBASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 SNORA64.4-201ENST00000516632 81 ntBASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 MIR4694-201ENST00000578534 80 ntBASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 MIR4513-201ENST00000581077 86 ntBASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 MIR3202-2-201ENST00000635980 79 ntBASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 MIR203B-201ENST00000636080 86 ntBASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PCDHGC4Q9Y5F7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGC4Q9Y5F7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHGC4Q9Y5F7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU6-661P-201ENST00000362409 107 ntBASIC3.16□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU6-170P-201ENST00000362832 104 ntBASIC3.16□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU6-363P-201ENST00000362895 105 ntBASIC3.16□□□□□ -1.9
PCDHGC4Q9Y5F7 RNA5SP374-201ENST00000362939 125 ntBASIC3.16□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU6-832P-201ENST00000363319 107 ntBASIC3.16□□□□□ -1.9
PCDHGC4Q9Y5F7 SNORA68.1-201ENST00000364537 132 ntBASIC3.16□□□□□ -1.9
PCDHGC4Q9Y5F7 Y_RNA.360-201ENST00000365512 102 ntBASIC3.16□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU6-409P-201ENST00000384114 104 ntBASIC3.16□□□□□ -1.9
PCDHGC4Q9Y5F7 SNORA7.4-201ENST00000384249 137 ntBASIC3.16□□□□□ -1.9
PCDHGC4Q9Y5F7 RNA5SP482-201ENST00000391269 118 ntBASIC3.16□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU6-733P-201ENST00000410759 104 ntBASIC3.16□□□□□ -1.9
PCDHGC4Q9Y5F7 AC004941.2-201ENST00000427009 228 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms