RNA–Protein interactions for RNA: ENST00000385216.1

MIR561-201, microRNA 561, humanhuman

BASIC

Gene MIR561, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR561-201ENST00000385216 CHIC1Q5VXU3 224 aa8.04□□□□□ -1.12
MIR561-201ENST00000385216 AEBP2Q6ZN18 517 aaPredicted RBP7.91□□□□□ -1.14
MIR561-201ENST00000385216 PHF23Q9BUL5 403 aaPredicted RBP7.18□□□□□ -1.26
MIR561-201ENST00000385216 PLPPR3Q6T4P5 718 aa6.66□□□□□ -1.34
MIR561-201ENST00000385216 SENP3Q9H4L4 574 aaPredicted RBP6.54□□□□□ -1.36
MIR561-201ENST00000385216 ADRA2BP18089 450 aa6.31□□□□□ -1.4
MIR561-201ENST00000385216 KCNA4P22459 653 aa6.26□□□□□ -1.41
MIR561-201ENST00000385216 EHMT2Q96KQ7 1210 aa6.26□□□□□ -1.41
MIR561-201ENST00000385216 PPP6R1Q9UPN7 881 aa6.22□□□□□ -1.41
MIR561-201ENST00000385216 FOXD1Q16676 465 aa6.1□□□□□ -1.43
MIR561-201ENST00000385216 CSRNP3Q8WYN3 585 aa6.08□□□□□ -1.44
MIR561-201ENST00000385216 SLC4A1APQ9BWU0 796 aaKnown RBP5.99□□□□□ -1.45
MIR561-201ENST00000385216 PPP4R3CPQ6ZMV5 832 aa5.95□□□□□ -1.46
MIR561-201ENST00000385216 NCBP3Q53F19 620 aaKnown RBP5.84□□□□□ -1.47
MIR561-201ENST00000385216 NPM3O75607 178 aaKnown RBP5.83□□□□□ -1.48
MIR561-201ENST00000385216 ZBTB22O15209 634 aa5.8□□□□□ -1.48
MIR561-201ENST00000385216 PIAS4Q8N2W9 510 aaPredicted RBP5.78□□□□□ -1.48
MIR561-201ENST00000385216 CNKSR2Q8WXI2 1034 aa5.68□□□□□ -1.5
MIR561-201ENST00000385216 SLC24A1O60721 1099 aa5.66□□□□□ -1.5
MIR561-201ENST00000385216 RTN4Q9NQC3 1192 aaKnown RBP5.63□□□□□ -1.51
MIR561-201ENST00000385216 DNAJC5BQ9UF47 199 aa5.61□□□□□ -1.51
MIR561-201ENST00000385216 FOXD4L1Q9NU39 408 aa5.6□□□□□ -1.51
MIR561-201ENST00000385216 SCAF1Q9H7N4 1312 aaKnown RBP5.58□□□□□ -1.52
MIR561-201ENST00000385216 AMER1Q5JTC6 1135 aaPredicted RBP5.57□□□□□ -1.52
MIR561-201ENST00000385216 MAPK8IP2Q13387 824 aaPredicted RBP5.54□□□□□ -1.52
MIR561-201ENST00000385216 RNF216Q9NWF9 866 aaPredicted RBP5.48□□□□□ -1.53
MIR561-201ENST00000385216 SLC4A2P04920 1241 aa5.44□□□□□ -1.54
MIR561-201ENST00000385216 FKBP8Q14318 412 aa5.41□□□□□ -1.54
MIR561-201ENST00000385216 MSH5O43196 834 aa5.39□□□□□ -1.55
MIR561-201ENST00000385216 ATXN8OSP0DMR3 200 aa5.38□□□□□ -1.55
MIR561-201ENST00000385216 HOXD11P31277 338 aaPredicted RBP5.38□□□□□ -1.55
MIR561-201ENST00000385216 MYCNP04198 464 aaPredicted RBP5.32□□□□□ -1.56
MIR561-201ENST00000385216 DMRT2Q9Y5R5 561 aa5.32□□□□□ -1.56
MIR561-201ENST00000385216 ATF5Q9Y2D1 282 aaPredicted RBP5.25□□□□□ -1.57
MIR561-201ENST00000385216 PLCB2Q00722 1185 aa5.15□□□□□ -1.59
MIR561-201ENST00000385216 PRKCSHP14314 528 aaPredicted RBP5.09□□□□□ -1.59
MIR561-201ENST00000385216 SAMD1Q6SPF0 538 aaPredicted RBP5.08□□□□□ -1.6
MIR561-201ENST00000385216 U3KPZ7 1027 aaPredicted RBP5.08□□□□□ -1.6
MIR561-201ENST00000385216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.07□□□□□ -1.6
MIR561-201ENST00000385216 FBXO3Q9UK99 471 aa5.07□□□□□ -1.6
MIR561-201ENST00000385216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.06□□□□□ -1.6
MIR561-201ENST00000385216 HAP1P54257 671 aaPredicted RBP5.06□□□□□ -1.6
MIR561-201ENST00000385216 HNRNPUL2Q1KMD3 747 aaKnown RBP5.06□□□□□ -1.6
MIR561-201ENST00000385216 ZNF219Q9P2Y4 722 aaPredicted RBP5.06□□□□□ -1.6
MIR561-201ENST00000385216 PROM2Q8N271 834 aa5.05□□□□□ -1.6
MIR561-201ENST00000385216 SPDYE4A6NLX3 237 aa5.04□□□□□ -1.6
MIR561-201ENST00000385216 IFNLR1Q8IU57 520 aaPredicted RBP5.04□□□□□ -1.6
MIR561-201ENST00000385216 BCANQ96GW7 911 aa5.03□□□□□ -1.6
MIR561-201ENST00000385216 VASPP50552 380 aaPredicted RBP5.02□□□□□ -1.61
MIR561-201ENST00000385216 MKRN4PQ13434 485 aaPredicted RBP5.02□□□□□ -1.61
MIR561-201ENST00000385216 PKD2Q13563 968 aa5.02□□□□□ -1.61
MIR561-201ENST00000385216 VSIG10Q8N0Z9 540 aa5.02□□□□□ -1.61
MIR561-201ENST00000385216 TAOK2Q9UL54 1235 aa5.02□□□□□ -1.61
MIR561-201ENST00000385216 DCAF8L1A6NGE4 600 aa5.01□□□□□ -1.61
MIR561-201ENST00000385216 KDM2AQ9Y2K7 1162 aa4.99□□□□□ -1.61
MIR561-201ENST00000385216 DCAF8L2P0C7V8 631 aa4.96□□□□□ -1.62
MIR561-201ENST00000385216 NPM1P06748 294 aaKnown RBP eCLIP4.95□□□□□ -1.62
MIR561-201ENST00000385216 FBLN2P98095 1184 aa4.95□□□□□ -1.62
MIR561-201ENST00000385216 TPRNQ4KMQ1 711 aa4.93□□□□□ -1.62
MIR561-201ENST00000385216 BBXQ8WY36 941 aaPredicted RBP4.93□□□□□ -1.62
MIR561-201ENST00000385216 PAXIP1Q6ZW49 1069 aaPredicted RBP4.89□□□□□ -1.63
MIR561-201ENST00000385216 APLP2Q06481 763 aa4.88□□□□□ -1.63
MIR561-201ENST00000385216 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.88□□□□□ -1.63
MIR561-201ENST00000385216 CFAP44Q96MT7 982 aa4.87□□□□□ -1.63
MIR561-201ENST00000385216 TSHZ2Q9NRE2 1034 aa4.87□□□□□ -1.63
MIR561-201ENST00000385216 ECM2O94769 699 aaPredicted RBP4.86□□□□□ -1.63
MIR561-201ENST00000385216 POLA2Q14181 598 aa4.86□□□□□ -1.63
MIR561-201ENST00000385216 SPOCK2Q92563 424 aa4.86□□□□□ -1.63
MIR561-201ENST00000385216 RGL2O15211 777 aa4.84□□□□□ -1.63
MIR561-201ENST00000385216 KLHL34Q8N239 644 aa4.83□□□□□ -1.64
MIR561-201ENST00000385216 SPRYD3Q8NCJ5 442 aa4.83□□□□□ -1.64
MIR561-201ENST00000385216 SPINK5Q9NQ38 1064 aaPredicted RBP4.83□□□□□ -1.64
MIR561-201ENST00000385216 TRHP20396 242 aaPredicted RBP4.82□□□□□ -1.64
MIR561-201ENST00000385216 DNAJC5Q9H3Z4 198 aa4.8□□□□□ -1.64
MIR561-201ENST00000385216 STAG3Q9UJ98 1225 aa4.78□□□□□ -1.64
MIR561-201ENST00000385216 CHGAP10645 457 aaKnown RBP4.76□□□□□ -1.65
MIR561-201ENST00000385216 TIMELESSQ9UNS1 1208 aa4.75□□□□□ -1.65
MIR561-201ENST00000385216 CAPN15O75808 1086 aa4.74□□□□□ -1.65
MIR561-201ENST00000385216 MIER1Q8N108 512 aa4.74□□□□□ -1.65
MIR561-201ENST00000385216 PLCD3Q8N3E9 789 aa4.73□□□□□ -1.65
MIR561-201ENST00000385216 ZNF692Q9BU19 519 aaPredicted RBP4.73□□□□□ -1.65
MIR561-201ENST00000385216 TULP1O00294 542 aaPredicted RBP4.72□□□□□ -1.65
MIR561-201ENST00000385216 ZBTB12Q9Y330 459 aaPredicted RBP4.72□□□□□ -1.65
MIR561-201ENST00000385216 GTF3C3Q9Y5Q9 886 aa4.72□□□□□ -1.65
MIR561-201ENST00000385216 RNF39Q9H2S5 420 aa4.71□□□□□ -1.66
MIR561-201ENST00000385216 CIZ1Q9ULV3 898 aaPredicted RBP4.71□□□□□ -1.66
MIR561-201ENST00000385216 SSUH2Q9Y2M2 353 aa4.71□□□□□ -1.66
MIR561-201ENST00000385216 ABCB7O75027 752 aa4.7□□□□□ -1.66
MIR561-201ENST00000385216 NBR1Q14596 966 aa4.7□□□□□ -1.66
MIR561-201ENST00000385216 HS6ST3Q8IZP7 471 aa4.7□□□□□ -1.66
MIR561-201ENST00000385216 NKX1-1Q15270 411 aaPredicted RBP4.68□□□□□ -1.66
MIR561-201ENST00000385216 PABPN1Q86U42 306 aaKnown RBP eCLIP4.68□□□□□ -1.66
MIR561-201ENST00000385216 RNF25Q96BH1 459 aaPredicted RBP4.68□□□□□ -1.66
MIR561-201ENST00000385216 SPDYE2BA6NHP3 402 aa4.67□□□□□ -1.66
MIR561-201ENST00000385216 GTPBP6O43824 516 aaPredicted RBP4.67□□□□□ -1.66
MIR561-201ENST00000385216 SPDYE6P0CI01 402 aa4.67□□□□□ -1.66
MIR561-201ENST00000385216 SPDYE2Q495Y8 402 aa4.67□□□□□ -1.66
MIR561-201ENST00000385216 OSCARQ8IYS5 282 aa4.65□□□□□ -1.67
MIR561-201ENST00000385216 TRIM41Q8WV44 630 aa4.65□□□□□ -1.67
MIR561-201ENST00000385216 C1QBPQ07021 282 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms