RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 AEBP2Q6ZN18 517 aaPredicted RBP11.6□□□□□ -0.55
CCDC30-201ENST00000340612 CHIC1Q5VXU3 224 aa10.7□□□□□ -0.7
CCDC30-201ENST00000340612 SENP3Q9H4L4 574 aaPredicted RBP9.84□□□□□ -0.83
CCDC30-201ENST00000340612 PHF23Q9BUL5 403 aaPredicted RBP9.71□□□□□ -0.85
CCDC30-201ENST00000340612 POTEDQ86YR6 584 aa9.37□□□□□ -0.91
CCDC30-201ENST00000340612 FOXD1Q16676 465 aa9.31□□□□□ -0.92
CCDC30-201ENST00000340612 MSH5O43196 834 aa8.77□□□□□ -1.01
CCDC30-201ENST00000340612 PIAS4Q8N2W9 510 aaPredicted RBP8.57□□□□□ -1.04
CCDC30-201ENST00000340612 PPP6R1Q9UPN7 881 aa8.43□□□□□ -1.06
CCDC30-201ENST00000340612 ADRA2BP18089 450 aa8.36□□□□□ -1.07
CCDC30-201ENST00000340612 PLPPR3Q6T4P5 718 aa8.18□□□□□ -1.1
CCDC30-201ENST00000340612 CACNB1Q02641 598 aaPredicted RBP7.84□□□□□ -1.16
CCDC30-201ENST00000340612 MAPK8IP2Q13387 824 aaPredicted RBP7.84□□□□□ -1.16
CCDC30-201ENST00000340612 DMRT2Q9Y5R5 561 aa7.76□□□□□ -1.17
CCDC30-201ENST00000340612 DCAF8L1A6NGE4 600 aa7.52□□□□□ -1.21
CCDC30-201ENST00000340612 SCAF1Q9H7N4 1312 aaKnown RBP7.5□□□□□ -1.21
CCDC30-201ENST00000340612 RNF39Q9H2S5 420 aa7.49□□□□□ -1.21
CCDC30-201ENST00000340612 C1QBPQ07021 282 aaKnown RBP7.31□□□□□ -1.24
CCDC30-201ENST00000340612 HOXD11P31277 338 aaPredicted RBP7.3□□□□□ -1.24
CCDC30-201ENST00000340612 POTEHQ6S545 545 aa7.24□□□□□ -1.25
CCDC30-201ENST00000340612 PPP4R3CPQ6ZMV5 832 aa7.16□□□□□ -1.26
CCDC30-201ENST00000340612 RNF216Q9NWF9 866 aaPredicted RBP7.12□□□□□ -1.27
CCDC30-201ENST00000340612 CNKSR2Q8WXI2 1034 aa7.08□□□□□ -1.28
CCDC30-201ENST00000340612 DNAJC5BQ9UF47 199 aa7.04□□□□□ -1.28
CCDC30-201ENST00000340612 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.97□□□□□ -1.29
CCDC30-201ENST00000340612 DSG3P32926 999 aa6.89□□□□□ -1.31
CCDC30-201ENST00000340612 SPINK5Q9NQ38 1064 aaPredicted RBP6.88□□□□□ -1.31
CCDC30-201ENST00000340612 CAPN15O75808 1086 aa6.83□□□□□ -1.32
CCDC30-201ENST00000340612 U3KPZ7 1027 aaPredicted RBP6.81□□□□□ -1.32
CCDC30-201ENST00000340612 ABCB7O75027 752 aa6.69□□□□□ -1.34
CCDC30-201ENST00000340612 NPM3O75607 178 aaKnown RBP6.69□□□□□ -1.34
CCDC30-201ENST00000340612 NCBP3Q53F19 620 aaKnown RBP6.68□□□□□ -1.34
CCDC30-201ENST00000340612 TRHP20396 242 aaPredicted RBP6.64□□□□□ -1.35
CCDC30-201ENST00000340612 CHRDL2Q6WN34 429 aa6.6□□□□□ -1.35
CCDC30-201ENST00000340612 SP7Q8TDD2 431 aaPredicted RBP6.57□□□□□ -1.36
CCDC30-201ENST00000340612 ZNF219Q9P2Y4 722 aaPredicted RBP6.53□□□□□ -1.36
CCDC30-201ENST00000340612 SLC4A2P04920 1241 aa6.51□□□□□ -1.37
CCDC30-201ENST00000340612 RBM42Q9BTD8 480 aaKnown RBP6.5□□□□□ -1.37
CCDC30-201ENST00000340612 APLP2Q06481 763 aa6.42□□□□□ -1.38
CCDC30-201ENST00000340612 PIP4P2Q8N4L2 257 aa6.37□□□□□ -1.39
CCDC30-201ENST00000340612 HAX1O00165 279 aa6.36□□□□□ -1.39
CCDC30-201ENST00000340612 POLA2Q14181 598 aa6.36□□□□□ -1.39
CCDC30-201ENST00000340612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.35□□□□□ -1.39
CCDC30-201ENST00000340612 HNRNPUL2Q1KMD3 747 aaKnown RBP6.35□□□□□ -1.39
CCDC30-201ENST00000340612 EVX2Q03828 476 aa6.33□□□□□ -1.4
CCDC30-201ENST00000340612 SAMD1Q6SPF0 538 aaPredicted RBP6.32□□□□□ -1.4
CCDC30-201ENST00000340612 KCNA4P22459 653 aa6.3□□□□□ -1.4
CCDC30-201ENST00000340612 REM2Q8IYK8 340 aaPredicted RBP6.29□□□□□ -1.4
CCDC30-201ENST00000340612 AKT1S1Q96B36 256 aa6.29□□□□□ -1.4
CCDC30-201ENST00000340612 PITPNM1O00562 1244 aa6.24□□□□□ -1.41
CCDC30-201ENST00000340612 FXR2P51116 673 aaKnown RBP eCLIP6.23□□□□□ -1.41
CCDC30-201ENST00000340612 OSCARQ8IYS5 282 aa6.19□□□□□ -1.42
CCDC30-201ENST00000340612 LHX8Q68G74 356 aa6.17□□□□□ -1.42
CCDC30-201ENST00000340612 PLSCR2Q9NRY7 297 aa6.17□□□□□ -1.42
CCDC30-201ENST00000340612 ATF5Q9Y2D1 282 aaPredicted RBP6.15□□□□□ -1.43
CCDC30-201ENST00000340612 EHMT2Q96KQ7 1210 aa6.13□□□□□ -1.43
CCDC30-201ENST00000340612 MYCNP04198 464 aaPredicted RBP6.12□□□□□ -1.43
CCDC30-201ENST00000340612 GABBR2O75899 941 aa6.1□□□□□ -1.43
CCDC30-201ENST00000340612 ZBTB12Q9Y330 459 aaPredicted RBP6.08□□□□□ -1.44
CCDC30-201ENST00000340612 PRKAR2AP13861 404 aaKnown RBP6.06□□□□□ -1.44
CCDC30-201ENST00000340612 C19orf67A6NJJ6 358 aa6.05□□□□□ -1.44
CCDC30-201ENST00000340612 POTEIP0CG38 1075 aa6.01□□□□□ -1.45
CCDC30-201ENST00000340612 SLC4A1APQ9BWU0 796 aaKnown RBP6□□□□□ -1.45
CCDC30-201ENST00000340612 CLEC11AQ9Y240 323 aa5.99□□□□□ -1.45
CCDC30-201ENST00000340612 CHADLQ6NUI6 762 aa5.96□□□□□ -1.45
CCDC30-201ENST00000340612 CSRNP3Q8WYN3 585 aa5.92□□□□□ -1.46
CCDC30-201ENST00000340612 SPDYE1Q8NFV5 336 aaPredicted RBP5.91□□□□□ -1.46
CCDC30-201ENST00000340612 SPDYE2BA6NHP3 402 aa5.9□□□□□ -1.46
CCDC30-201ENST00000340612 SPDYE6P0CI01 402 aa5.9□□□□□ -1.46
CCDC30-201ENST00000340612 SPDYE2Q495Y8 402 aa5.9□□□□□ -1.46
CCDC30-201ENST00000340612 FOXD4L1Q9NU39 408 aa5.85□□□□□ -1.47
CCDC30-201ENST00000340612 POTEMA6NI47 508 aa5.84□□□□□ -1.47
CCDC30-201ENST00000340612 CD44P16070 742 aaKnown RBP5.84□□□□□ -1.47
CCDC30-201ENST00000340612 OTUD5Q96G74 571 aa5.84□□□□□ -1.47
CCDC30-201ENST00000340612 ZBTB22O15209 634 aa5.82□□□□□ -1.48
CCDC30-201ENST00000340612 POTEB2H3BUK9 544 aa5.81□□□□□ -1.48
CCDC30-201ENST00000340612 POTEGQ6S5H5 508 aa5.81□□□□□ -1.48
CCDC30-201ENST00000340612 MKRN4PQ13434 485 aaPredicted RBP5.81□□□□□ -1.48
CCDC30-201ENST00000340612 ZNF692Q9BU19 519 aaPredicted RBP5.81□□□□□ -1.48
CCDC30-201ENST00000340612 SSUH2Q9Y2M2 353 aa5.81□□□□□ -1.48
CCDC30-201ENST00000340612 DCBLD2Q96PD2 775 aa5.81□□□□□ -1.48
CCDC30-201ENST00000340612 FBLN2P98095 1184 aa5.8□□□□□ -1.48
CCDC30-201ENST00000340612 PRR29P0C7W0 189 aa5.79□□□□□ -1.48
CCDC30-201ENST00000340612 FARP1Q9Y4F1 1045 aaPredicted RBP5.76□□□□□ -1.49
CCDC30-201ENST00000340612 GALR2O43603 387 aaPredicted RBP5.73□□□□□ -1.49
CCDC30-201ENST00000340612 PABPN1Q86U42 306 aaKnown RBP eCLIP5.73□□□□□ -1.49
CCDC30-201ENST00000340612 CLCN6P51797 869 aa5.7□□□□□ -1.5
CCDC30-201ENST00000340612 ZNF579Q8NAF0 562 aaKnown RBP5.7□□□□□ -1.5
CCDC30-201ENST00000340612 ZRANB1Q9UGI0 708 aa5.7□□□□□ -1.5
CCDC30-201ENST00000340612 LCE2DQ5TA82 110 aaPredicted RBP5.68□□□□□ -1.5
CCDC30-201ENST00000340612 PELP1Q8IZL8 1130 aaKnown RBP5.68□□□□□ -1.5
CCDC30-201ENST00000340612 POTEJP0CG39 1038 aa5.67□□□□□ -1.5
CCDC30-201ENST00000340612 ATXN8OSP0DMR3 200 aa5.66□□□□□ -1.5
CCDC30-201ENST00000340612 PCDH10Q9P2E7 1040 aa5.65□□□□□ -1.5
CCDC30-201ENST00000340612 FAM163AQ96GL9 167 aaPredicted RBP5.62□□□□□ -1.51
CCDC30-201ENST00000340612 PHF12Q96QT6 1004 aa5.62□□□□□ -1.51
CCDC30-201ENST00000340612 CREBZFQ9NS37 354 aa5.58□□□□□ -1.52
CCDC30-201ENST00000340612 METRNQ9UJH8 293 aa5.58□□□□□ -1.52
CCDC30-201ENST00000340612 ATMINO43313 823 aaPredicted RBP5.52□□□□□ -1.53
CCDC30-201ENST00000340612 ASTLQ6HA08 431 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 270.2 ms