RNA–Protein interactions for RNA: ENST00000455840.1

RPL39P39-201, Transcript of ribosomal protein L39 pseudogene 39, humanhuman

BASIC

Gene RPL39P39, Length 151 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P39-201ENST00000455840 AEBP2Q6ZN18 517 aaPredicted RBP13.56□□□□□ -0.24
RPL39P39-201ENST00000455840 CHIC1Q5VXU3 224 aa12.67□□□□□ -0.38
RPL39P39-201ENST00000455840 POTEDQ86YR6 584 aa11.86□□□□□ -0.51
RPL39P39-201ENST00000455840 SENP3Q9H4L4 574 aaPredicted RBP11.73□□□□□ -0.53
RPL39P39-201ENST00000455840 PHF23Q9BUL5 403 aaPredicted RBP11.45□□□□□ -0.58
RPL39P39-201ENST00000455840 FOXD1Q16676 465 aa11.02□□□□□ -0.65
RPL39P39-201ENST00000455840 MSH5O43196 834 aa10.67□□□□□ -0.7
RPL39P39-201ENST00000455840 PIAS4Q8N2W9 510 aaPredicted RBP10.06□□□□□ -0.8
RPL39P39-201ENST00000455840 CACNB1Q02641 598 aaPredicted RBP9.66□□□□□ -0.86
RPL39P39-201ENST00000455840 PPP6R1Q9UPN7 881 aa9.64□□□□□ -0.87
RPL39P39-201ENST00000455840 ADRA2BP18089 450 aa9.54□□□□□ -0.88
RPL39P39-201ENST00000455840 PLPPR3Q6T4P5 718 aa9.23□□□□□ -0.93
RPL39P39-201ENST00000455840 DMRT2Q9Y5R5 561 aa9.17□□□□□ -0.94
RPL39P39-201ENST00000455840 POTEHQ6S545 545 aa9.13□□□□□ -0.95
RPL39P39-201ENST00000455840 MAPK8IP2Q13387 824 aaPredicted RBP9.03□□□□□ -0.96
RPL39P39-201ENST00000455840 RNF39Q9H2S5 420 aa9.02□□□□□ -0.97
RPL39P39-201ENST00000455840 C1QBPQ07021 282 aaKnown RBP8.86□□□□□ -0.99
RPL39P39-201ENST00000455840 SCAF1Q9H7N4 1312 aaKnown RBP8.78□□□□□ -1
RPL39P39-201ENST00000455840 DCAF8L1A6NGE4 600 aa8.77□□□□□ -1.01
RPL39P39-201ENST00000455840 HOXD11P31277 338 aaPredicted RBP8.5□□□□□ -1.05
RPL39P39-201ENST00000455840 DNAJC5BQ9UF47 199 aa8.43□□□□□ -1.06
RPL39P39-201ENST00000455840 RNF216Q9NWF9 866 aaPredicted RBP8.2□□□□□ -1.1
RPL39P39-201ENST00000455840 SP7Q8TDD2 431 aaPredicted RBP8.15□□□□□ -1.1
RPL39P39-201ENST00000455840 DSG3P32926 999 aa8.14□□□□□ -1.11
RPL39P39-201ENST00000455840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.07□□□□□ -1.12
RPL39P39-201ENST00000455840 CNKSR2Q8WXI2 1034 aa8.04□□□□□ -1.12
RPL39P39-201ENST00000455840 PPP4R3CPQ6ZMV5 832 aa7.98□□□□□ -1.13
RPL39P39-201ENST00000455840 CHRDL2Q6WN34 429 aa7.97□□□□□ -1.13
RPL39P39-201ENST00000455840 CAPN15O75808 1086 aa7.96□□□□□ -1.14
RPL39P39-201ENST00000455840 SPINK5Q9NQ38 1064 aaPredicted RBP7.93□□□□□ -1.14
RPL39P39-201ENST00000455840 PLSCR2Q9NRY7 297 aa7.85□□□□□ -1.15
RPL39P39-201ENST00000455840 RBM42Q9BTD8 480 aaKnown RBP7.8□□□□□ -1.16
RPL39P39-201ENST00000455840 U3KPZ7 1027 aaPredicted RBP7.79□□□□□ -1.16
RPL39P39-201ENST00000455840 HAX1O00165 279 aa7.68□□□□□ -1.18
RPL39P39-201ENST00000455840 ABCB7O75027 752 aa7.67□□□□□ -1.18
RPL39P39-201ENST00000455840 LHX8Q68G74 356 aa7.63□□□□□ -1.19
RPL39P39-201ENST00000455840 TRHP20396 242 aaPredicted RBP7.62□□□□□ -1.19
RPL39P39-201ENST00000455840 PIP4P2Q8N4L2 257 aa7.59□□□□□ -1.19
RPL39P39-201ENST00000455840 ZNF219Q9P2Y4 722 aaPredicted RBP7.59□□□□□ -1.19
RPL39P39-201ENST00000455840 EVX2Q03828 476 aa7.52□□□□□ -1.21
RPL39P39-201ENST00000455840 APLP2Q06481 763 aa7.51□□□□□ -1.21
RPL39P39-201ENST00000455840 AKT1S1Q96B36 256 aa7.44□□□□□ -1.22
RPL39P39-201ENST00000455840 NCBP3Q53F19 620 aaKnown RBP7.43□□□□□ -1.22
RPL39P39-201ENST00000455840 FXR2P51116 673 aaKnown RBP eCLIP7.42□□□□□ -1.22
RPL39P39-201ENST00000455840 REM2Q8IYK8 340 aaPredicted RBP7.37□□□□□ -1.23
RPL39P39-201ENST00000455840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.31□□□□□ -1.24
RPL39P39-201ENST00000455840 GABBR2O75899 941 aa7.31□□□□□ -1.24
RPL39P39-201ENST00000455840 HNRNPUL2Q1KMD3 747 aaKnown RBP7.31□□□□□ -1.24
RPL39P39-201ENST00000455840 NPM3O75607 178 aaKnown RBP7.29□□□□□ -1.24
RPL39P39-201ENST00000455840 PITPNM1O00562 1244 aa7.28□□□□□ -1.24
RPL39P39-201ENST00000455840 POLA2Q14181 598 aa7.24□□□□□ -1.25
RPL39P39-201ENST00000455840 POTEMA6NI47 508 aa7.22□□□□□ -1.25
RPL39P39-201ENST00000455840 SAMD1Q6SPF0 538 aaPredicted RBP7.22□□□□□ -1.25
RPL39P39-201ENST00000455840 PCDH10Q9P2E7 1040 aa7.22□□□□□ -1.25
RPL39P39-201ENST00000455840 C19orf67A6NJJ6 358 aa7.21□□□□□ -1.26
RPL39P39-201ENST00000455840 SLC4A2P04920 1241 aa7.2□□□□□ -1.26
RPL39P39-201ENST00000455840 POTEGQ6S5H5 508 aa7.17□□□□□ -1.26
RPL39P39-201ENST00000455840 POTEIP0CG38 1075 aa7.14□□□□□ -1.27
RPL39P39-201ENST00000455840 PRKAR2AP13861 404 aaKnown RBP7.08□□□□□ -1.28
RPL39P39-201ENST00000455840 OTUD5Q96G74 571 aa7.05□□□□□ -1.28
RPL39P39-201ENST00000455840 ZBTB12Q9Y330 459 aaPredicted RBP7.05□□□□□ -1.28
RPL39P39-201ENST00000455840 OSCARQ8IYS5 282 aa7.01□□□□□ -1.29
RPL39P39-201ENST00000455840 CLCN6P51797 869 aa6.96□□□□□ -1.3
RPL39P39-201ENST00000455840 DCBLD2Q96PD2 775 aa6.92□□□□□ -1.3
RPL39P39-201ENST00000455840 POTEB2H3BUK9 544 aa6.88□□□□□ -1.31
RPL39P39-201ENST00000455840 SPDYE1Q8NFV5 336 aaPredicted RBP6.85□□□□□ -1.31
RPL39P39-201ENST00000455840 CLEC11AQ9Y240 323 aa6.83□□□□□ -1.32
RPL39P39-201ENST00000455840 LCE2DQ5TA82 110 aaPredicted RBP6.82□□□□□ -1.32
RPL39P39-201ENST00000455840 CD44P16070 742 aaKnown RBP6.8□□□□□ -1.32
RPL39P39-201ENST00000455840 CHADLQ6NUI6 762 aa6.78□□□□□ -1.32
RPL39P39-201ENST00000455840 MYCNP04198 464 aaPredicted RBP6.77□□□□□ -1.33
RPL39P39-201ENST00000455840 SPDYE2BA6NHP3 402 aa6.75□□□□□ -1.33
RPL39P39-201ENST00000455840 SPDYE6P0CI01 402 aa6.75□□□□□ -1.33
RPL39P39-201ENST00000455840 SPDYE2Q495Y8 402 aa6.75□□□□□ -1.33
RPL39P39-201ENST00000455840 FAM163AQ96GL9 167 aaPredicted RBP6.75□□□□□ -1.33
RPL39P39-201ENST00000455840 CDAN1Q8IWY9 1227 aa6.72□□□□□ -1.33
RPL39P39-201ENST00000455840 MAMSTRQ6ZN01 415 aa6.68□□□□□ -1.34
RPL39P39-201ENST00000455840 ZNF579Q8NAF0 562 aaKnown RBP6.68□□□□□ -1.34
RPL39P39-201ENST00000455840 ATF5Q9Y2D1 282 aaPredicted RBP6.66□□□□□ -1.34
RPL39P39-201ENST00000455840 MMRN1Q13201 1228 aa6.65□□□□□ -1.34
RPL39P39-201ENST00000455840 FARP1Q9Y4F1 1045 aaPredicted RBP6.65□□□□□ -1.34
RPL39P39-201ENST00000455840 POTEJP0CG39 1038 aa6.64□□□□□ -1.35
RPL39P39-201ENST00000455840 GALR2O43603 387 aaPredicted RBP6.63□□□□□ -1.35
RPL39P39-201ENST00000455840 PRR29P0C7W0 189 aa6.63□□□□□ -1.35
RPL39P39-201ENST00000455840 PELP1Q8IZL8 1130 aaKnown RBP6.59□□□□□ -1.35
RPL39P39-201ENST00000455840 SPNS2Q8IVW8 549 aa6.58□□□□□ -1.36
RPL39P39-201ENST00000455840 ZRANB1Q9UGI0 708 aa6.57□□□□□ -1.36
RPL39P39-201ENST00000455840 SCUBE2Q9NQ36 999 aa6.56□□□□□ -1.36
RPL39P39-201ENST00000455840 SSUH2Q9Y2M2 353 aa6.56□□□□□ -1.36
RPL39P39-201ENST00000455840 METRNQ9UJH8 293 aa6.55□□□□□ -1.36
RPL39P39-201ENST00000455840 C7P10643 843 aa6.54□□□□□ -1.36
RPL39P39-201ENST00000455840 SLC39A7Q92504 469 aa6.52□□□□□ -1.37
RPL39P39-201ENST00000455840 ZNF692Q9BU19 519 aaPredicted RBP6.51□□□□□ -1.37
RPL39P39-201ENST00000455840 FBLN2P98095 1184 aa6.49□□□□□ -1.37
RPL39P39-201ENST00000455840 ASTLQ6HA08 431 aaPredicted RBP6.46□□□□□ -1.38
RPL39P39-201ENST00000455840 ATMINO43313 823 aaPredicted RBP6.42□□□□□ -1.38
RPL39P39-201ENST00000455840 ST18O60284 1047 aa6.39□□□□□ -1.39
RPL39P39-201ENST00000455840 PHF12Q96QT6 1004 aa6.39□□□□□ -1.39
RPL39P39-201ENST00000455840 PABPN1Q86U42 306 aaKnown RBP eCLIP6.38□□□□□ -1.39
RPL39P39-201ENST00000455840 KCNA4P22459 653 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms