RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 CHIC1Q5VXU3 224 aa7.8□□□□□ -1.16
HMHB1-202ENST00000638299 AEBP2Q6ZN18 517 aaPredicted RBP7.61□□□□□ -1.19
HMHB1-202ENST00000638299 PHF23Q9BUL5 403 aaPredicted RBP7.01□□□□□ -1.29
HMHB1-202ENST00000638299 PLPPR3Q6T4P5 718 aa6.5□□□□□ -1.37
HMHB1-202ENST00000638299 EHMT2Q96KQ7 1210 aa6.5□□□□□ -1.37
HMHB1-202ENST00000638299 KCNA4P22459 653 aa6.32□□□□□ -1.4
HMHB1-202ENST00000638299 ADRA2BP18089 450 aa6.23□□□□□ -1.41
HMHB1-202ENST00000638299 SENP3Q9H4L4 574 aaPredicted RBP6.22□□□□□ -1.41
HMHB1-202ENST00000638299 CSRNP3Q8WYN3 585 aa6.19□□□□□ -1.42
HMHB1-202ENST00000638299 SLC24A1O60721 1099 aa6.14□□□□□ -1.43
HMHB1-202ENST00000638299 PPP6R1Q9UPN7 881 aa6.05□□□□□ -1.44
HMHB1-202ENST00000638299 SLC4A1APQ9BWU0 796 aaKnown RBP6.04□□□□□ -1.44
HMHB1-202ENST00000638299 RTN4Q9NQC3 1192 aaKnown RBP5.94□□□□□ -1.46
HMHB1-202ENST00000638299 ZBTB22O15209 634 aa5.86□□□□□ -1.47
HMHB1-202ENST00000638299 PPP4R3CPQ6ZMV5 832 aa5.85□□□□□ -1.47
HMHB1-202ENST00000638299 FOXD1Q16676 465 aa5.82□□□□□ -1.48
HMHB1-202ENST00000638299 AMER1Q5JTC6 1135 aaPredicted RBP5.82□□□□□ -1.48
HMHB1-202ENST00000638299 NPM3O75607 178 aaKnown RBP5.77□□□□□ -1.49
HMHB1-202ENST00000638299 NCBP3Q53F19 620 aaKnown RBP5.74□□□□□ -1.49
HMHB1-202ENST00000638299 FOXD4L1Q9NU39 408 aa5.59□□□□□ -1.51
HMHB1-202ENST00000638299 PIAS4Q8N2W9 510 aaPredicted RBP5.57□□□□□ -1.52
HMHB1-202ENST00000638299 FKBP8Q14318 412 aa5.54□□□□□ -1.52
HMHB1-202ENST00000638299 CNKSR2Q8WXI2 1034 aa5.52□□□□□ -1.53
HMHB1-202ENST00000638299 PRKCSHP14314 528 aaPredicted RBP5.51□□□□□ -1.53
HMHB1-202ENST00000638299 DNAJC5BQ9UF47 199 aa5.4□□□□□ -1.54
HMHB1-202ENST00000638299 PLCB2Q00722 1185 aa5.38□□□□□ -1.55
HMHB1-202ENST00000638299 MAPK8IP2Q13387 824 aaPredicted RBP5.38□□□□□ -1.55
HMHB1-202ENST00000638299 SLC4A2P04920 1241 aa5.36□□□□□ -1.55
HMHB1-202ENST00000638299 SCAF1Q9H7N4 1312 aaKnown RBP5.35□□□□□ -1.55
HMHB1-202ENST00000638299 HAP1P54257 671 aaPredicted RBP5.35□□□□□ -1.55
HMHB1-202ENST00000638299 TAOK2Q9UL54 1235 aa5.35□□□□□ -1.55
HMHB1-202ENST00000638299 BCANQ96GW7 911 aa5.31□□□□□ -1.56
HMHB1-202ENST00000638299 ATXN8OSP0DMR3 200 aa5.29□□□□□ -1.56
HMHB1-202ENST00000638299 TPRNQ4KMQ1 711 aa5.29□□□□□ -1.56
HMHB1-202ENST00000638299 RNF216Q9NWF9 866 aaPredicted RBP5.29□□□□□ -1.56
HMHB1-202ENST00000638299 MYCNP04198 464 aaPredicted RBP5.24□□□□□ -1.57
HMHB1-202ENST00000638299 ATF5Q9Y2D1 282 aaPredicted RBP5.22□□□□□ -1.57
HMHB1-202ENST00000638299 DCAF8L2P0C7V8 631 aa5.21□□□□□ -1.58
HMHB1-202ENST00000638299 VSIG10Q8N0Z9 540 aa5.21□□□□□ -1.58
HMHB1-202ENST00000638299 KDM2AQ9Y2K7 1162 aa5.21□□□□□ -1.58
HMHB1-202ENST00000638299 FBLN2P98095 1184 aa5.2□□□□□ -1.58
HMHB1-202ENST00000638299 TIMELESSQ9UNS1 1208 aa5.2□□□□□ -1.58
HMHB1-202ENST00000638299 HOXD11P31277 338 aaPredicted RBP5.16□□□□□ -1.58
HMHB1-202ENST00000638299 TULP1O00294 542 aaPredicted RBP5.15□□□□□ -1.59
HMHB1-202ENST00000638299 DAXXQ9UER7 740 aaPredicted RBP5.15□□□□□ -1.59
HMHB1-202ENST00000638299 PKD2Q13563 968 aa5.13□□□□□ -1.59
HMHB1-202ENST00000638299 IFNLR1Q8IU57 520 aaPredicted RBP5.11□□□□□ -1.59
HMHB1-202ENST00000638299 NPM1P06748 294 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMHB1-202ENST00000638299 PAXIP1Q6ZW49 1069 aaPredicted RBP5.09□□□□□ -1.59
HMHB1-202ENST00000638299 VASPP50552 380 aaPredicted RBP5.08□□□□□ -1.6
HMHB1-202ENST00000638299 CFAP44Q96MT7 982 aa5.08□□□□□ -1.6
HMHB1-202ENST00000638299 FBXO3Q9UK99 471 aa5.08□□□□□ -1.6
HMHB1-202ENST00000638299 DMRT2Q9Y5R5 561 aa5.08□□□□□ -1.6
HMHB1-202ENST00000638299 GTF3C3Q9Y5Q9 886 aa5.07□□□□□ -1.6
HMHB1-202ENST00000638299 ARXQ96QS3 562 aa5.06□□□□□ -1.6
HMHB1-202ENST00000638299 TSHZ2Q9NRE2 1034 aa5.06□□□□□ -1.6
HMHB1-202ENST00000638299 MSH5O43196 834 aa5.05□□□□□ -1.6
HMHB1-202ENST00000638299 BBXQ8WY36 941 aaPredicted RBP5.05□□□□□ -1.6
HMHB1-202ENST00000638299 SPDYE4A6NLX3 237 aa5.04□□□□□ -1.6
HMHB1-202ENST00000638299 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.02□□□□□ -1.61
HMHB1-202ENST00000638299 PROM2Q8N271 834 aa5.01□□□□□ -1.61
HMHB1-202ENST00000638299 MKRN4PQ13434 485 aaPredicted RBP4.99□□□□□ -1.61
HMHB1-202ENST00000638299 ECM2O94769 699 aaPredicted RBP4.97□□□□□ -1.61
HMHB1-202ENST00000638299 ZNF219Q9P2Y4 722 aaPredicted RBP4.97□□□□□ -1.61
HMHB1-202ENST00000638299 TMEM132AQ24JP5 1023 aa4.96□□□□□ -1.62
HMHB1-202ENST00000638299 HOMEZQ8IX15 550 aa4.96□□□□□ -1.62
HMHB1-202ENST00000638299 SPRYD3Q8NCJ5 442 aa4.96□□□□□ -1.62
HMHB1-202ENST00000638299 RGL2O15211 777 aa4.95□□□□□ -1.62
HMHB1-202ENST00000638299 NBR1Q14596 966 aa4.94□□□□□ -1.62
HMHB1-202ENST00000638299 SAMD1Q6SPF0 538 aaPredicted RBP4.94□□□□□ -1.62
HMHB1-202ENST00000638299 U3KPZ7 1027 aaPredicted RBP4.94□□□□□ -1.62
HMHB1-202ENST00000638299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMHB1-202ENST00000638299 DNAJC5Q9H3Z4 198 aa4.92□□□□□ -1.62
HMHB1-202ENST00000638299 C14orf37Q86TY3 774 aa4.91□□□□□ -1.62
HMHB1-202ENST00000638299 SPOCK2Q92563 424 aa4.9□□□□□ -1.63
HMHB1-202ENST00000638299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.89□□□□□ -1.63
HMHB1-202ENST00000638299 HNRNPUL2Q1KMD3 747 aaKnown RBP4.89□□□□□ -1.63
HMHB1-202ENST00000638299 KLHL34Q8N239 644 aa4.89□□□□□ -1.63
HMHB1-202ENST00000638299 DCAF8L1A6NGE4 600 aa4.88□□□□□ -1.63
HMHB1-202ENST00000638299 CHGAP10645 457 aaKnown RBP4.88□□□□□ -1.63
HMHB1-202ENST00000638299 ERICH6Q7L0X2 663 aa4.87□□□□□ -1.63
HMHB1-202ENST00000638299 SUPT5HO00267 1087 aaKnown RBP4.85□□□□□ -1.63
HMHB1-202ENST00000638299 PODXL2Q9NZ53 605 aa4.8□□□□□ -1.64
HMHB1-202ENST00000638299 CIZ1Q9ULV3 898 aaPredicted RBP4.78□□□□□ -1.64
HMHB1-202ENST00000638299 NKX1-1Q15270 411 aaPredicted RBP4.77□□□□□ -1.65
HMHB1-202ENST00000638299 HS6ST3Q8IZP7 471 aa4.76□□□□□ -1.65
HMHB1-202ENST00000638299 GTPBP6O43824 516 aaPredicted RBP4.75□□□□□ -1.65
HMHB1-202ENST00000638299 UBTFP17480 764 aaKnown RBP4.75□□□□□ -1.65
HMHB1-202ENST00000638299 TRHP20396 242 aaPredicted RBP4.75□□□□□ -1.65
HMHB1-202ENST00000638299 PLCD3Q8N3E9 789 aa4.75□□□□□ -1.65
HMHB1-202ENST00000638299 BRPF1P55201 1214 aaPredicted RBP4.74□□□□□ -1.65
HMHB1-202ENST00000638299 POLA2Q14181 598 aa4.74□□□□□ -1.65
HMHB1-202ENST00000638299 RNF25Q96BH1 459 aaPredicted RBP4.74□□□□□ -1.65
HMHB1-202ENST00000638299 RANGAP1P46060 587 aaPredicted RBP4.72□□□□□ -1.65
HMHB1-202ENST00000638299 TRIM26Q12899 539 aaPredicted RBP4.72□□□□□ -1.65
HMHB1-202ENST00000638299 MIER1Q8N108 512 aa4.72□□□□□ -1.65
HMHB1-202ENST00000638299 SPINK5Q9NQ38 1064 aaPredicted RBP4.71□□□□□ -1.66
HMHB1-202ENST00000638299 APLP2Q06481 763 aa4.7□□□□□ -1.66
HMHB1-202ENST00000638299 LMOD2Q6P5Q4 547 aa4.7□□□□□ -1.66
HMHB1-202ENST00000638299 STAG3Q9UJ98 1225 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms