Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPBQ9Y5S2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPBQ9Y5S2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CDC42BPBQ9Y5S2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC28.56■■■□□ 2.16
CDC42BPBQ9Y5S2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
CDC42BPBQ9Y5S2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC28.55■■■□□ 2.16
CDC42BPBQ9Y5S2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPBQ9Y5S2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
CDC42BPBQ9Y5S2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPBQ9Y5S2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
CDC42BPBQ9Y5S2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC28.55■■■□□ 2.16
CDC42BPBQ9Y5S2 SAPCD2P3-201ENST00000455031 850 ntBASIC28.55■■■□□ 2.16
CDC42BPBQ9Y5S2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPBQ9Y5S2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPBQ9Y5S2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPBQ9Y5S2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPBQ9Y5S2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPBQ9Y5S2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CDC42BPBQ9Y5S2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC28.55■■■□□ 2.16
CDC42BPBQ9Y5S2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 AP003733.1-201ENST00000491725 852 ntBASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 AC091304.2-201ENST00000564639 760 ntBASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC28.54■■■□□ 2.16
CDC42BPBQ9Y5S2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 NSUN5P1-202ENST00000421140 1535 ntBASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 NSUN5P2-203ENST00000457352 1529 ntBASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 IGHGP-201ENST00000390555 1178 ntBASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 AL662844.1-201ENST00000546340 181 ntBASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 AC090616.6-201ENST00000582640 721 ntBASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 AL353801.3-201ENST00000609898 542 ntBASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
CDC42BPBQ9Y5S2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC28.52■■■□□ 2.16
CDC42BPBQ9Y5S2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
CDC42BPBQ9Y5S2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC28.51■■■□□ 2.16
CDC42BPBQ9Y5S2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC28.51■■■□□ 2.16
CDC42BPBQ9Y5S2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.16
CDC42BPBQ9Y5S2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC28.51■■■□□ 2.15
CDC42BPBQ9Y5S2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CDC42BPBQ9Y5S2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CDC42BPBQ9Y5S2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC28.51■■■□□ 2.15
CDC42BPBQ9Y5S2 PENK-208ENST00000523051 772 ntTSL 5 BASIC28.51■■■□□ 2.15
CDC42BPBQ9Y5S2 Z69720.1-201ENST00000601483 472 ntBASIC28.51■■■□□ 2.15
CDC42BPBQ9Y5S2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC28.51■■■□□ 2.15
CDC42BPBQ9Y5S2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CDC42BPBQ9Y5S2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CDC42BPBQ9Y5S2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CDC42BPBQ9Y5S2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CDC42BPBQ9Y5S2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC28.5■■■□□ 2.15
CDC42BPBQ9Y5S2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CDC42BPBQ9Y5S2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
CDC42BPBQ9Y5S2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CDC42BPBQ9Y5S2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC28.49■■■□□ 2.15
CDC42BPBQ9Y5S2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC28.49■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms