Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 AC006011.2-201ENST00000621313 1158 ntBASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 AC141257.4-201ENST00000634557 245 ntBASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 AC136944.6-201ENST00000634818 245 ntBASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN16Q9Y5I7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 MIR3180-5-201ENST00000583743 153 ntBASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 AC098818.2-201ENST00000564925 2320 ntBASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN16Q9Y5I7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 AC104076.2-201ENST00000448912 469 ntBASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 KRT18P21-201ENST00000515767 1272 ntBASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 BX323043.1-201ENST00000641006 1765 ntBASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN16Q9Y5I7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 AC009947.2-201ENST00000444014 672 ntBASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 CROCCP3-202ENST00000420820 1947 ntBASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 AC018445.3-201ENST00000624177 1945 ntBASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN16Q9Y5I7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CLDN16Q9Y5I7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms