Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 AC117947.1-201ENST00000427448 529 ntBASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB9Q9Y5E1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 FEM1AP3-201ENST00000403722 1741 ntBASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 AC139887.4-201ENST00000607877 719 ntBASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 AC116562.4-202ENST00000641738 218 ntBASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 FP475955.4-201ENST00000623131 1990 ntBASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PCDHB9Q9Y5E1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 FAM8A6P-201ENST00000407496 1135 ntBASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 KRT18P48-201ENST00000434763 852 ntBASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 CCR12P-201ENST00000446203 998 ntBASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 AL121894.2-201ENST00000602977 491 ntBASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 FAM87A-204ENST00000613235 858 ntBASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 AP000550.4-202ENST00000639755 178 ntBASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB9Q9Y5E1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB9Q9Y5E1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms