Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MRPS28Q9Y2Q9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.28■□□□□ 0.2
MRPS28Q9Y2Q9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 OR6D1P-202ENST00000641007 5290 ntBASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 AC083880.1-201ENST00000608266 535 ntBASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
MRPS28Q9Y2Q9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MRPS28Q9Y2Q9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MRPS28Q9Y2Q9 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.27■□□□□ 0.19
MRPS28Q9Y2Q9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.27■□□□□ 0.19
MRPS28Q9Y2Q9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
MRPS28Q9Y2Q9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
MRPS28Q9Y2Q9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
MRPS28Q9Y2Q9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.27■□□□□ 0.19
MRPS28Q9Y2Q9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MRPS28Q9Y2Q9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MRPS28Q9Y2Q9 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.27■□□□□ 0.19
MRPS28Q9Y2Q9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MRPS28Q9Y2Q9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 AC098934.4-201ENST00000564127 592 ntBASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 AL160286.2-201ENST00000567150 934 ntBASIC16.26■□□□□ 0.19
MRPS28Q9Y2Q9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms