Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 AL133373.2-201ENST00000623187 2828 ntBASIC16.84■□□□□ 0.29
COPS3Q9UNS2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COPS3Q9UNS2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
COPS3Q9UNS2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COPS3Q9UNS2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.83■□□□□ 0.28
COPS3Q9UNS2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.83■□□□□ 0.28
COPS3Q9UNS2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COPS3Q9UNS2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 TSPY23P-201ENST00000440136 739 ntBASIC16.82■□□□□ 0.28
COPS3Q9UNS2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.82■□□□□ 0.28
COPS3Q9UNS2 HLA-A-209ENST00000638375 975 ntBASIC16.82■□□□□ 0.28
COPS3Q9UNS2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
COPS3Q9UNS2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
COPS3Q9UNS2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms