Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AL390955.1-201ENST00000428694 934 ntBASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCKIPSDQ9NZQ3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 CYP2D8P-201ENST00000433633 1490 ntBASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 TERF1P1-201ENST00000311003 1181 ntBASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 AC128688.1-201ENST00000487626 519 ntBASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 KRT18P35-201ENST00000510488 1269 ntBASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 EGLN1P1-201ENST00000531623 762 ntBASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 AC141586.3-201ENST00000562166 1838 ntBASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 AL138781.2-201ENST00000617896 1843 ntBASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NCKIPSDQ9NZQ3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.08■□□□□ 0.65
NCKIPSDQ9NZQ3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NCKIPSDQ9NZQ3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NCKIPSDQ9NZQ3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NCKIPSDQ9NZQ3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NCKIPSDQ9NZQ3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.08■□□□□ 0.65
NCKIPSDQ9NZQ3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NCKIPSDQ9NZQ3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NCKIPSDQ9NZQ3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NCKIPSDQ9NZQ3 AL161938.1-201ENST00000569833 2180 ntBASIC19.08■□□□□ 0.65
NCKIPSDQ9NZQ3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 LIN28AP1-201ENST00000429574 405 ntBASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 B3GAT3P1-201ENST00000471720 806 ntBASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCKIPSDQ9NZQ3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 TEX21P-204ENST00000641479 1693 ntBASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NCKIPSDQ9NZQ3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCKIPSDQ9NZQ3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms