Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
MKS1Q9NXB0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MKS1Q9NXB0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MKS1Q9NXB0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
MKS1Q9NXB0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 KRT8P32-201ENST00000512863 1461 ntBASIC18.67■□□□□ 0.58
MKS1Q9NXB0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 ESPNP-201ENST00000270691 2015 ntBASIC18.67■□□□□ 0.58
MKS1Q9NXB0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MKS1Q9NXB0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 KRT8P45-201ENST00000414328 1447 ntBASIC18.66■□□□□ 0.58
MKS1Q9NXB0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 POU5F1P3-201ENST00000428824 1078 ntBASIC18.66■□□□□ 0.58
MKS1Q9NXB0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 AC083880.1-201ENST00000608266 535 ntBASIC18.66■□□□□ 0.58
MKS1Q9NXB0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MKS1Q9NXB0 AC112777.1-201ENST00000540175 1423 ntBASIC18.66■□□□□ 0.58
MKS1Q9NXB0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 SLC29A4P1-201ENST00000398760 971 ntBASIC18.65■□□□□ 0.58
MKS1Q9NXB0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 TSPY6P-201ENST00000448518 926 ntBASIC18.65■□□□□ 0.58
MKS1Q9NXB0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.65■□□□□ 0.58
MKS1Q9NXB0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MKS1Q9NXB0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.58
MKS1Q9NXB0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
MKS1Q9NXB0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms