Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CUEDC1Q9NWM3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.27■□□□□ 0.51
CUEDC1Q9NWM3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
CUEDC1Q9NWM3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CUEDC1Q9NWM3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CUEDC1Q9NWM3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CUEDC1Q9NWM3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CUEDC1Q9NWM3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CUEDC1Q9NWM3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
CUEDC1Q9NWM3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 AC098818.2-201ENST00000564925 2320 ntBASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 AC145285.6-201ENST00000604632 637 ntBASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CUEDC1Q9NWM3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CUEDC1Q9NWM3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms