Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 KRT16P5-201ENST00000455284 522 ntBASIC17.6■□□□□ 0.41
RLIMQ9NVW2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.6■□□□□ 0.41
RLIMQ9NVW2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RLIMQ9NVW2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.59■□□□□ 0.41
RLIMQ9NVW2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 AC128676.1-201ENST00000454392 318 ntBASIC17.59■□□□□ 0.41
RLIMQ9NVW2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 PCDHB18P-201ENST00000524813 2368 ntBASIC17.59■□□□□ 0.41
RLIMQ9NVW2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RLIMQ9NVW2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RLIMQ9NVW2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RLIMQ9NVW2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.58■□□□□ 0.41
RLIMQ9NVW2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RLIMQ9NVW2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms