Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 VENTXP7-201ENST00000475503 772 ntBASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 AC124864.1-201ENST00000623408 392 ntBASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
ZFYVE28Q9HCC9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.58■■□□□ 1.04
ZFYVE28Q9HCC9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
ZFYVE28Q9HCC9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZFYVE28Q9HCC9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.58■■□□□ 1.04
ZFYVE28Q9HCC9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 LINC00565-201ENST00000562710 2331 ntBASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 RNA5SP419-201ENST00000515908 135 ntBASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 KRT18P58-201ENST00000527480 1120 ntBASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 AC092865.5-201ENST00000545435 363 ntBASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 AL592071.1-201ENST00000611956 408 ntBASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZFYVE28Q9HCC9 NSUN5P1-202ENST00000421140 1535 ntBASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 NSUN5P2-203ENST00000457352 1529 ntBASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 MIR1233-2-201ENST00000408138 82 ntBASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 MIR1233-1-201ENST00000408722 82 ntBASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 NUS1P2-201ENST00000417358 873 ntBASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 TP73-AS1-207ENST00000624167 988 ntBASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.56■■□□□ 1.04
ZFYVE28Q9HCC9 HOXB1-202ENST00000577092 1414 ntBASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 FAM197Y8-203ENST00000450145 560 ntBASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 SLC25A1P1-201ENST00000528351 927 ntBASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZFYVE28Q9HCC9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
ZFYVE28Q9HCC9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms