Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUCKS1Q9H1E3 BICD1-207ENST00000551848 1962 ntBASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 AL390961.4-201ENST00000623958 2535 ntBASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 AC133681.1-201ENST00000465482 601 ntBASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.48■□□□□ 0.87
NUCKS1Q9H1E3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 LETM1P2-201ENST00000597330 2178 ntBASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 AC138932.1-201ENST00000534164 6830 ntBASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.47■□□□□ 0.87
NUCKS1Q9H1E3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 AC020763.4-201ENST00000623414 4170 ntBASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 UBE2SP1-201ENST00000450587 669 ntBASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUCKS1Q9H1E3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms