Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 PNMA6B-201ENST00000538162 1200 ntBASIC19.69■□□□□ 0.74
DDX47Q9H0S4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 AC120498.8-201ENST00000614275 531 ntBASIC19.69■□□□□ 0.74
DDX47Q9H0S4 AL121829.2-201ENST00000620908 328 ntBASIC19.69■□□□□ 0.74
DDX47Q9H0S4 HLA-B-256ENST00000639848 1089 ntBASIC19.69■□□□□ 0.74
DDX47Q9H0S4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 TSPY21P-201ENST00000433481 731 ntBASIC19.68■□□□□ 0.74
DDX47Q9H0S4 TSPY23P-201ENST00000440136 739 ntBASIC19.68■□□□□ 0.74
DDX47Q9H0S4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 AL121832.2-201ENST00000610979 668 ntBASIC19.68■□□□□ 0.74
DDX47Q9H0S4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX47Q9H0S4 AC138932.1-201ENST00000534164 6830 ntBASIC19.68■□□□□ 0.74
DDX47Q9H0S4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DDX47Q9H0S4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 AL499627.1-201ENST00000569373 2188 ntBASIC19.66■□□□□ 0.74
DDX47Q9H0S4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 GUSBP6-202ENST00000438529 1198 ntBASIC19.66■□□□□ 0.74
DDX47Q9H0S4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 MYC-209ENST00000641252 345 ntBASIC19.66■□□□□ 0.74
DDX47Q9H0S4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX47Q9H0S4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX47Q9H0S4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms