Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 CROCCP5-201ENST00000436658 830 ntBASIC17.33■□□□□ 0.36
COPS4Q9BT78 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.33■□□□□ 0.36
COPS4Q9BT78 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.33■□□□□ 0.36
COPS4Q9BT78 RAP2CP1-201ENST00000605103 478 ntBASIC17.33■□□□□ 0.36
COPS4Q9BT78 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
COPS4Q9BT78 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COPS4Q9BT78 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
COPS4Q9BT78 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.33■□□□□ 0.36
COPS4Q9BT78 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.33■□□□□ 0.36
COPS4Q9BT78 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
COPS4Q9BT78 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.33■□□□□ 0.36
COPS4Q9BT78 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COPS4Q9BT78 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COPS4Q9BT78 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COPS4Q9BT78 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COPS4Q9BT78 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COPS4Q9BT78 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COPS4Q9BT78 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COPS4Q9BT78 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.33■□□□□ 0.36
COPS4Q9BT78 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
COPS4Q9BT78 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COPS4Q9BT78 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS4Q9BT78 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS4Q9BT78 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COPS4Q9BT78 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COPS4Q9BT78 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS4Q9BT78 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS4Q9BT78 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS4Q9BT78 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS4Q9BT78 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS4Q9BT78 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS4Q9BT78 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS4Q9BT78 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 AL121832.2-201ENST00000610979 668 ntBASIC17.32■□□□□ 0.36
COPS4Q9BT78 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
COPS4Q9BT78 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.32■□□□□ 0.36
COPS4Q9BT78 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
COPS4Q9BT78 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.31■□□□□ 0.36
COPS4Q9BT78 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS4Q9BT78 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS4Q9BT78 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS4Q9BT78 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS4Q9BT78 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.31■□□□□ 0.36
COPS4Q9BT78 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.31■□□□□ 0.36
COPS4Q9BT78 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.31■□□□□ 0.36
COPS4Q9BT78 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.31■□□□□ 0.36
COPS4Q9BT78 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.31■□□□□ 0.36
COPS4Q9BT78 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.31■□□□□ 0.36
COPS4Q9BT78 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.31■□□□□ 0.36
COPS4Q9BT78 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS4Q9BT78 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.31■□□□□ 0.36
COPS4Q9BT78 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS4Q9BT78 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS4Q9BT78 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.31■□□□□ 0.36
COPS4Q9BT78 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS4Q9BT78 OR6D1P-202ENST00000641007 5290 ntBASIC17.31■□□□□ 0.36
COPS4Q9BT78 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.31■□□□□ 0.36
COPS4Q9BT78 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS4Q9BT78 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COPS4Q9BT78 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.31■□□□□ 0.36
COPS4Q9BT78 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPS4Q9BT78 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.3■□□□□ 0.36
COPS4Q9BT78 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPS4Q9BT78 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS4Q9BT78 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPS4Q9BT78 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS4Q9BT78 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COPS4Q9BT78 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS4Q9BT78 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS4Q9BT78 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
COPS4Q9BT78 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS4Q9BT78 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
COPS4Q9BT78 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS4Q9BT78 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COPS4Q9BT78 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.3■□□□□ 0.36
COPS4Q9BT78 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
COPS4Q9BT78 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
COPS4Q9BT78 AL390719.1-204ENST00000412397 1219 ntBASIC17.3■□□□□ 0.36
COPS4Q9BT78 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.3■□□□□ 0.36
COPS4Q9BT78 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.3■□□□□ 0.36
COPS4Q9BT78 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.3■□□□□ 0.36
COPS4Q9BT78 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.3■□□□□ 0.36
COPS4Q9BT78 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
COPS4Q9BT78 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.3■□□□□ 0.36
COPS4Q9BT78 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COPS4Q9BT78 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.3■□□□□ 0.36
COPS4Q9BT78 AC104417.2-201ENST00000562989 1793 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms