Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 FAM207BP-201ENST00000447172 505 ntBASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCGF1Q9BSM1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
PCGF1Q9BSM1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PCGF1Q9BSM1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
PCGF1Q9BSM1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.83■□□□□ 0.13
PCGF1Q9BSM1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.83■□□□□ 0.13
PCGF1Q9BSM1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.83■□□□□ 0.13
PCGF1Q9BSM1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 LINC01568-207ENST00000641790 1380 ntBASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 AC120498.9-201ENST00000339021 3867 ntBASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF1Q9BSM1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 C2orf69P3-201ENST00000565542 1120 ntBASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 AC130371.2-201ENST00000619443 611 ntBASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 AC097493.4-201ENST00000641197 219 ntBASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 CYP2D8P-201ENST00000433633 1490 ntBASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.82■□□□□ 0.12
PCGF1Q9BSM1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF1Q9BSM1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms