Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC38A3Q99624 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC38A3Q99624 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SLC38A3Q99624 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC38A3Q99624 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC38A3Q99624 GPAT2P1-201ENST00000444924 1672 ntBASIC18.31■□□□□ 0.52
SLC38A3Q99624 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC38A3Q99624 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLC38A3Q99624 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC38A3Q99624 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC38A3Q99624 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC38A3Q99624 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC38A3Q99624 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC38A3Q99624 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC38A3Q99624 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC38A3Q99624 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC38A3Q99624 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC38A3Q99624 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC38A3Q99624 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC38A3Q99624 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC38A3Q99624 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC38A3Q99624 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
SLC38A3Q99624 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC38A3Q99624 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC38A3Q99624 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC38A3Q99624 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SLC38A3Q99624 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A3Q99624 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SLC38A3Q99624 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC38A3Q99624 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A3Q99624 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A3Q99624 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A3Q99624 MCCD1P1-208ENST00000445732 328 ntBASIC18.29■□□□□ 0.52
SLC38A3Q99624 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC38A3Q99624 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC38A3Q99624 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC38A3Q99624 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SLC38A3Q99624 AC091076.1-201ENST00000610741 619 ntBASIC18.29■□□□□ 0.52
SLC38A3Q99624 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC38A3Q99624 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A3Q99624 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A3Q99624 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC38A3Q99624 KRT8P3-201ENST00000519669 1449 ntBASIC18.29■□□□□ 0.52
SLC38A3Q99624 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A3Q99624 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC38A3Q99624 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A3Q99624 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A3Q99624 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SLC38A3Q99624 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC38A3Q99624 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC38A3Q99624 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC38A3Q99624 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC38A3Q99624 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A3Q99624 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A3Q99624 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A3Q99624 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A3Q99624 AL023284.2-201ENST00000405850 579 ntBASIC18.28■□□□□ 0.52
SLC38A3Q99624 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.28■□□□□ 0.52
SLC38A3Q99624 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 AL671277.2-201ENST00000458060 996 ntBASIC18.28■□□□□ 0.52
SLC38A3Q99624 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 GCSHP2-201ENST00000560971 527 ntBASIC18.28■□□□□ 0.52
SLC38A3Q99624 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 AL358472.4-201ENST00000633140 710 ntBASIC18.28■□□□□ 0.52
SLC38A3Q99624 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A3Q99624 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A3Q99624 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A3Q99624 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
SLC38A3Q99624 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A3Q99624 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC38A3Q99624 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.27■□□□□ 0.52
SLC38A3Q99624 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A3Q99624 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A3Q99624 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC38A3Q99624 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A3Q99624 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A3Q99624 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC38A3Q99624 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SLC38A3Q99624 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A3Q99624 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A3Q99624 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.27■□□□□ 0.52
SLC38A3Q99624 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.27■□□□□ 0.52
SLC38A3Q99624 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC38A3Q99624 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.27■□□□□ 0.52
SLC38A3Q99624 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.27■□□□□ 0.52
SLC38A3Q99624 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms