Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.07■□□□□ 0.64
PHOX2BQ99453 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PHOX2BQ99453 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PHOX2BQ99453 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHOX2BQ99453 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PHOX2BQ99453 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHOX2BQ99453 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHOX2BQ99453 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PHOX2BQ99453 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PHOX2BQ99453 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHOX2BQ99453 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHOX2BQ99453 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHOX2BQ99453 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
PHOX2BQ99453 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.06■□□□□ 0.64
PHOX2BQ99453 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PHOX2BQ99453 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.06■□□□□ 0.64
PHOX2BQ99453 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHOX2BQ99453 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHOX2BQ99453 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.06■□□□□ 0.64
PHOX2BQ99453 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.06■□□□□ 0.64
PHOX2BQ99453 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHOX2BQ99453 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHOX2BQ99453 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PHOX2BQ99453 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHOX2BQ99453 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHOX2BQ99453 UPF3AP3-201ENST00000420996 769 ntBASIC19.06■□□□□ 0.64
PHOX2BQ99453 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.06■□□□□ 0.64
PHOX2BQ99453 AC034232.1-201ENST00000506026 1064 ntBASIC19.06■□□□□ 0.64
PHOX2BQ99453 PGAM5P1-201ENST00000518923 814 ntBASIC19.06■□□□□ 0.64
PHOX2BQ99453 AC009065.1-201ENST00000564055 1225 ntBASIC19.06■□□□□ 0.64
PHOX2BQ99453 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PHOX2BQ99453 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PHOX2BQ99453 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PHOX2BQ99453 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHOX2BQ99453 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.06■□□□□ 0.64
PHOX2BQ99453 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PHOX2BQ99453 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.06■□□□□ 0.64
PHOX2BQ99453 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHOX2BQ99453 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PHOX2BQ99453 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHOX2BQ99453 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.05■□□□□ 0.64
PHOX2BQ99453 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHOX2BQ99453 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.05■□□□□ 0.64
PHOX2BQ99453 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.05■□□□□ 0.64
PHOX2BQ99453 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHOX2BQ99453 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.05■□□□□ 0.64
PHOX2BQ99453 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
PHOX2BQ99453 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.05■□□□□ 0.64
PHOX2BQ99453 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.05■□□□□ 0.64
PHOX2BQ99453 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.05■□□□□ 0.64
PHOX2BQ99453 MIR4674-201ENST00000582457 87 ntBASIC19.05■□□□□ 0.64
PHOX2BQ99453 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.05■□□□□ 0.64
PHOX2BQ99453 REXO1L6P-202ENST00000619970 1078 ntBASIC19.05■□□□□ 0.64
PHOX2BQ99453 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHOX2BQ99453 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHOX2BQ99453 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHOX2BQ99453 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PHOX2BQ99453 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PHOX2BQ99453 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.05■□□□□ 0.64
PHOX2BQ99453 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.05■□□□□ 0.64
PHOX2BQ99453 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHOX2BQ99453 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHOX2BQ99453 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.04■□□□□ 0.64
PHOX2BQ99453 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHOX2BQ99453 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHOX2BQ99453 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHOX2BQ99453 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PHOX2BQ99453 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHOX2BQ99453 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHOX2BQ99453 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHOX2BQ99453 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.04■□□□□ 0.64
PHOX2BQ99453 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PHOX2BQ99453 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PHOX2BQ99453 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.04■□□□□ 0.64
PHOX2BQ99453 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.04■□□□□ 0.64
PHOX2BQ99453 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PHOX2BQ99453 AC079602.3-201ENST00000623931 403 ntBASIC19.04■□□□□ 0.64
PHOX2BQ99453 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.04■□□□□ 0.64
PHOX2BQ99453 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PHOX2BQ99453 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.04■□□□□ 0.64
PHOX2BQ99453 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PHOX2BQ99453 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHOX2BQ99453 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHOX2BQ99453 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHOX2BQ99453 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PHOX2BQ99453 RPSAP43-201ENST00000402237 625 ntBASIC19.03■□□□□ 0.64
PHOX2BQ99453 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.03■□□□□ 0.64
PHOX2BQ99453 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.03■□□□□ 0.64
PHOX2BQ99453 RNF126P1-202ENST00000569893 925 ntBASIC19.03■□□□□ 0.64
PHOX2BQ99453 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHOX2BQ99453 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHOX2BQ99453 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHOX2BQ99453 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.03■□□□□ 0.64
PHOX2BQ99453 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHOX2BQ99453 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHOX2BQ99453 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHOX2BQ99453 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PHOX2BQ99453 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PHOX2BQ99453 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PHOX2BQ99453 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms