Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
AP1S3Q96PC3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.27□□□□□ -0.13
AP1S3Q96PC3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 PRORSD1P-202ENST00000563365 2154 ntBASIC14.26□□□□□ -0.13
AP1S3Q96PC3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP1S3Q96PC3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 AC138969.2-201ENST00000532739 9932 ntBASIC14.25□□□□□ -0.13
AP1S3Q96PC3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 TERF1P5-201ENST00000477545 1207 ntBASIC14.25□□□□□ -0.13
AP1S3Q96PC3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 MFSD11-216ENST00000590393 1141 ntBASIC14.25□□□□□ -0.13
AP1S3Q96PC3 AC010536.3-201ENST00000620306 533 ntBASIC14.25□□□□□ -0.13
AP1S3Q96PC3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP1S3Q96PC3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms