Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 ANO7L1-203ENST00000602586 1720 ntBASIC19.44■□□□□ 0.7
C9orf72Q96LT7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.44■□□□□ 0.7
C9orf72Q96LT7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 RPS2P4-201ENST00000476944 856 ntBASIC19.43■□□□□ 0.7
C9orf72Q96LT7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C9orf72Q96LT7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms