Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 PRSS44-201ENST00000515154 1146 ntBASIC19.09■□□□□ 0.65
LRRC39Q96DD0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC39Q96DD0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.08■□□□□ 0.65
LRRC39Q96DD0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC39Q96DD0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
LRRC39Q96DD0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
LRRC39Q96DD0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC39Q96DD0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC39Q96DD0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
LRRC39Q96DD0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 AL355802.2-201ENST00000402069 882 ntBASIC19.08■□□□□ 0.64
LRRC39Q96DD0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 NOC2LP1-202ENST00000452600 2235 ntBASIC19.08■□□□□ 0.64
LRRC39Q96DD0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC39Q96DD0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 MTMR9LP-203ENST00000426597 1545 ntBASIC19.07■□□□□ 0.64
LRRC39Q96DD0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 AC239809.2-201ENST00000415381 517 ntBASIC19.07■□□□□ 0.64
LRRC39Q96DD0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 AC090192.1-201ENST00000517740 490 ntBASIC19.07■□□□□ 0.64
LRRC39Q96DD0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 KRT8P32-201ENST00000512863 1461 ntBASIC19.07■□□□□ 0.64
LRRC39Q96DD0 ABALON-201ENST00000629058 1903 ntBASIC19.07■□□□□ 0.64
LRRC39Q96DD0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.07■□□□□ 0.64
LRRC39Q96DD0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 KRT8P11-201ENST00000409686 1436 ntBASIC19.07■□□□□ 0.64
LRRC39Q96DD0 KRT8P3-201ENST00000519669 1449 ntBASIC19.07■□□□□ 0.64
LRRC39Q96DD0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.07■□□□□ 0.64
LRRC39Q96DD0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 AC126763.1-201ENST00000552015 2118 ntBASIC19.06■□□□□ 0.64
LRRC39Q96DD0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 KRASP1-201ENST00000407852 552 ntBASIC19.06■□□□□ 0.64
LRRC39Q96DD0 AC133681.1-201ENST00000465482 601 ntBASIC19.06■□□□□ 0.64
LRRC39Q96DD0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 AC092666.2-201ENST00000613287 246 ntBASIC19.06■□□□□ 0.64
LRRC39Q96DD0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms