Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 AC124283.5-201ENST00000624661 1809 ntBASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXRED1Q96CU9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 TSPY21P-201ENST00000433481 731 ntBASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 CD99P1-205ENST00000527459 561 ntBASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 AC083880.1-201ENST00000608266 535 ntBASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXRED1Q96CU9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 HLA-B-256ENST00000639848 1089 ntBASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 NOC2LP1-202ENST00000452600 2235 ntBASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXRED1Q96CU9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 AC018470.1-201ENST00000624790 3129 ntBASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms