Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 AL390719.1-204ENST00000412397 1219 ntBASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 YBX1P10-201ENST00000444752 975 ntBASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 AC018470.1-201ENST00000624790 3129 ntBASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB3IL1Q8TBN0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB3IL1Q8TBN0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.83■□□□□ 0.61
RAB3IL1Q8TBN0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB3IL1Q8TBN0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB3IL1Q8TBN0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
RAB3IL1Q8TBN0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB3IL1Q8TBN0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB3IL1Q8TBN0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.82■□□□□ 0.6
RAB3IL1Q8TBN0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms