Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 AL357033.4-201ENST00000617703 1807 ntBASIC20.26■□□□□ 0.83
LMO3Q8TAP4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 CRYGFP-201ENST00000418459 633 ntBASIC20.26■□□□□ 0.83
LMO3Q8TAP4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.26■□□□□ 0.83
LMO3Q8TAP4 AC005082.1-201ENST00000413042 2259 ntBASIC20.25■□□□□ 0.83
LMO3Q8TAP4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 TSPY15P-201ENST00000457163 923 ntBASIC20.25■□□□□ 0.83
LMO3Q8TAP4 CA15P1-201ENST00000481698 905 ntBASIC20.25■□□□□ 0.83
LMO3Q8TAP4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 AL355075.4-201ENST00000554988 638 ntBASIC20.25■□□□□ 0.83
LMO3Q8TAP4 MIR4785-201ENST00000585005 73 ntBASIC20.25■□□□□ 0.83
LMO3Q8TAP4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.25■□□□□ 0.83
LMO3Q8TAP4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 AL109659.2-201ENST00000606809 1674 ntBASIC20.24■□□□□ 0.83
LMO3Q8TAP4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 NEFHP1-201ENST00000412845 2629 ntBASIC20.24■□□□□ 0.83
LMO3Q8TAP4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.24■□□□□ 0.83
LMO3Q8TAP4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 UNC93B2-201ENST00000285383 730 ntBASIC20.23■□□□□ 0.83
LMO3Q8TAP4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.23■□□□□ 0.83
LMO3Q8TAP4 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms