Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.41■■□□□ 1.34
SMC5Q8IY18 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SMC5Q8IY18 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
SMC5Q8IY18 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC23.41■■□□□ 1.34
SMC5Q8IY18 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMC5Q8IY18 EML3-217ENST00000531557 2509 ntTSL 5 BASIC23.41■■□□□ 1.34
SMC5Q8IY18 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMC5Q8IY18 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMC5Q8IY18 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC23.41■■□□□ 1.34
SMC5Q8IY18 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
SMC5Q8IY18 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.41■■□□□ 1.34
SMC5Q8IY18 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.41■■□□□ 1.34
SMC5Q8IY18 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMC5Q8IY18 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
SMC5Q8IY18 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.41■■□□□ 1.34
SMC5Q8IY18 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SMC5Q8IY18 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
SMC5Q8IY18 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SMC5Q8IY18 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SMC5Q8IY18 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 FAM201B-201ENST00000458407 597 ntBASIC23.4■■□□□ 1.34
SMC5Q8IY18 AC098590.1-201ENST00000468126 897 ntBASIC23.4■■□□□ 1.34
SMC5Q8IY18 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SMC5Q8IY18 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
SMC5Q8IY18 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
SMC5Q8IY18 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC23.4■■□□□ 1.34
SMC5Q8IY18 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
SMC5Q8IY18 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.39■■□□□ 1.34
SMC5Q8IY18 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.39■■□□□ 1.34
SMC5Q8IY18 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SMC5Q8IY18 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SMC5Q8IY18 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SMC5Q8IY18 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.34
SMC5Q8IY18 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.39■■□□□ 1.33
SMC5Q8IY18 FAM207BP-201ENST00000447172 505 ntBASIC23.39■■□□□ 1.33
SMC5Q8IY18 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.39■■□□□ 1.33
SMC5Q8IY18 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.39■■□□□ 1.33
SMC5Q8IY18 AP000692.2-201ENST00000608391 879 ntBASIC23.39■■□□□ 1.33
SMC5Q8IY18 AL390961.4-201ENST00000623958 2535 ntBASIC23.39■■□□□ 1.33
SMC5Q8IY18 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC23.39■■□□□ 1.33
SMC5Q8IY18 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SMC5Q8IY18 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
SMC5Q8IY18 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.39■■□□□ 1.33
SMC5Q8IY18 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SMC5Q8IY18 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.39■■□□□ 1.33
SMC5Q8IY18 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
SMC5Q8IY18 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.39■■□□□ 1.33
SMC5Q8IY18 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
SMC5Q8IY18 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.39■■□□□ 1.33
SMC5Q8IY18 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.39■■□□□ 1.33
SMC5Q8IY18 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SMC5Q8IY18 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMC5Q8IY18 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC23.38■■□□□ 1.33
SMC5Q8IY18 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.38■■□□□ 1.33
SMC5Q8IY18 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.38■■□□□ 1.33
SMC5Q8IY18 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.38■■□□□ 1.33
SMC5Q8IY18 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMC5Q8IY18 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC23.38■■□□□ 1.33
SMC5Q8IY18 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMC5Q8IY18 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC23.38■■□□□ 1.33
SMC5Q8IY18 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMC5Q8IY18 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SMC5Q8IY18 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMC5Q8IY18 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SMC5Q8IY18 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.38■■□□□ 1.33
SMC5Q8IY18 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.38■■□□□ 1.33
SMC5Q8IY18 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.38■■□□□ 1.33
SMC5Q8IY18 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.38■■□□□ 1.33
SMC5Q8IY18 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.38■■□□□ 1.33
SMC5Q8IY18 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.38■■□□□ 1.33
SMC5Q8IY18 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SMC5Q8IY18 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMC5Q8IY18 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMC5Q8IY18 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMC5Q8IY18 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SMC5Q8IY18 AL357033.4-201ENST00000617703 1807 ntBASIC23.38■■□□□ 1.33
SMC5Q8IY18 AC007613.1-201ENST00000572811 2597 ntBASIC23.38■■□□□ 1.33
SMC5Q8IY18 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC23.38■■□□□ 1.33
SMC5Q8IY18 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMC5Q8IY18 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
SMC5Q8IY18 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMC5Q8IY18 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SMC5Q8IY18 AC079598.2-202ENST00000546624 1451 ntBASIC23.37■■□□□ 1.33
SMC5Q8IY18 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.37■■□□□ 1.33
SMC5Q8IY18 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
SMC5Q8IY18 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms