Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 AF186192.3-201ENST00000583427 947 ntBASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 AC073195.1-201ENST00000607241 877 ntBASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 AL359736.2-201ENST00000621992 437 ntBASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 CR392000.1-201ENST00000624770 1228 ntBASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.42■□□□□ 0.7
CDKL3Q8IVW4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 KRT18P29-201ENST00000397031 1267 ntBASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 AC011298.2-201ENST00000617989 482 ntBASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 ITM2C-210ENST00000620962 501 ntBASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.41■□□□□ 0.7
CDKL3Q8IVW4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 HEIH-201ENST00000623091 1652 ntBASIC19.4■□□□□ 0.7
CDKL3Q8IVW4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CDKL3Q8IVW4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CDKL3Q8IVW4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CDKL3Q8IVW4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDKL3Q8IVW4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 KRT8P3-201ENST00000519669 1449 ntBASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL3Q8IVW4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms