Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.39■□□□□ 0.37
PTCHD4Q6ZW05 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 AC083880.1-201ENST00000608266 535 ntBASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 FZD10-202ENST00000539839 3282 ntBASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 ANO7L1-203ENST00000602586 1720 ntBASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.38■□□□□ 0.37
PTCHD4Q6ZW05 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 PNMA6B-201ENST00000538162 1200 ntBASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTCHD4Q6ZW05 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 FEM1AP3-201ENST00000403722 1741 ntBASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.36■□□□□ 0.37
PTCHD4Q6ZW05 AC060766.5-201ENST00000590539 871 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms