Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COLCA1Q6ZS62 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.27■□□□□ 0.19
COLCA1Q6ZS62 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.27■□□□□ 0.19
COLCA1Q6ZS62 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 FITM1-202ENST00000559294 800 ntBASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 AC008622.2-201ENST00000617006 1229 ntBASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 AL109659.2-201ENST00000606809 1674 ntBASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COLCA1Q6ZS62 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
COLCA1Q6ZS62 RCC2P3-201ENST00000418112 1537 ntBASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 AL355075.4-201ENST00000554988 638 ntBASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 AL023803.3-201ENST00000615559 522 ntBASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COLCA1Q6ZS62 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
COLCA1Q6ZS62 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms