Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC11.99□□□□□ -0.49
LINC00575Q6W349 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
LINC00575Q6W349 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
LINC00575Q6W349 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
LINC00575Q6W349 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
LINC00575Q6W349 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 TFP1-202ENST00000475455 1573 ntBASIC11.98□□□□□ -0.49
LINC00575Q6W349 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 TERF1P2-201ENST00000583350 1212 ntBASIC11.98□□□□□ -0.49
LINC00575Q6W349 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00575Q6W349 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LINC00575Q6W349 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 AC099398.1-201ENST00000567919 2776 ntBASIC11.97□□□□□ -0.49
LINC00575Q6W349 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 CEP83-AS1-201ENST00000623122 2482 ntBASIC11.97□□□□□ -0.49
LINC00575Q6W349 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 CALM3-202ENST00000391918 702 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 KRT18P68-201ENST00000392293 1000 ntBASIC11.97□□□□□ -0.49
LINC00575Q6W349 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 AL136967.2-201ENST00000623968 743 ntBASIC11.97□□□□□ -0.49
LINC00575Q6W349 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00575Q6W349 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00575Q6W349 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms