Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.1■■□□□ 1.29
CASC1Q6TDU7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASC1Q6TDU7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASC1Q6TDU7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 HTR7P1-202ENST00000624664 4411 ntBASIC23.09■■□□□ 1.29
CASC1Q6TDU7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CASC1Q6TDU7 KRT8P41-201ENST00000533985 1514 ntBASIC23.08■■□□□ 1.29
CASC1Q6TDU7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
CASC1Q6TDU7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CASC1Q6TDU7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CASC1Q6TDU7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CASC1Q6TDU7 KRT18P29-201ENST00000397031 1267 ntBASIC23.08■■□□□ 1.29
CASC1Q6TDU7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CASC1Q6TDU7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.08■■□□□ 1.29
CASC1Q6TDU7 RN7SL471P-201ENST00000580476 299 ntBASIC23.08■■□□□ 1.29
CASC1Q6TDU7 ITM2C-210ENST00000620962 501 ntBASIC23.08■■□□□ 1.29
CASC1Q6TDU7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CASC1Q6TDU7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.08■■□□□ 1.29
CASC1Q6TDU7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CASC1Q6TDU7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC23.08■■□□□ 1.29
CASC1Q6TDU7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CASC1Q6TDU7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.28
CASC1Q6TDU7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
CASC1Q6TDU7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CASC1Q6TDU7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.28
CASC1Q6TDU7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.08■■□□□ 1.28
CASC1Q6TDU7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CASC1Q6TDU7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
CASC1Q6TDU7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 AC124016.1-201ENST00000609552 612 ntBASIC23.07■■□□□ 1.28
CASC1Q6TDU7 AC110285.5-201ENST00000611501 352 ntBASIC23.07■■□□□ 1.28
CASC1Q6TDU7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CASC1Q6TDU7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 AC090164.3-201ENST00000610780 2143 ntBASIC23.06■■□□□ 1.28
CASC1Q6TDU7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 NEFHP1-201ENST00000412845 2629 ntBASIC23.06■■□□□ 1.28
CASC1Q6TDU7 ANO7L1-203ENST00000602586 1720 ntBASIC23.06■■□□□ 1.28
CASC1Q6TDU7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 AC133681.1-201ENST00000465482 601 ntBASIC23.06■■□□□ 1.28
CASC1Q6TDU7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms