Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CASC4Q6P4E1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 KRASP1-201ENST00000407852 552 ntBASIC19.28■□□□□ 0.68
CASC4Q6P4E1 TSPY21P-201ENST00000433481 731 ntBASIC19.28■□□□□ 0.68
CASC4Q6P4E1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 Z98044.1-201ENST00000632503 1764 ntBASIC19.28■□□□□ 0.68
CASC4Q6P4E1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASC4Q6P4E1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 WIZP1-201ENST00000531444 2299 ntBASIC19.27■□□□□ 0.68
CASC4Q6P4E1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 AL031598.1-201ENST00000561511 1773 ntBASIC19.27■□□□□ 0.68
CASC4Q6P4E1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 AL512353.2-201ENST00000448759 1962 ntBASIC19.27■□□□□ 0.68
CASC4Q6P4E1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.27■□□□□ 0.68
CASC4Q6P4E1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CASC4Q6P4E1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.26■□□□□ 0.67
CASC4Q6P4E1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 KRT18P6-201ENST00000555540 1265 ntBASIC19.26■□□□□ 0.67
CASC4Q6P4E1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASC4Q6P4E1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASC4Q6P4E1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms