Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 MIR572-201ENST00000384983 95 ntBASIC14.28□□□□□ -0.12
MRPL54Q6P161 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 ZNF815P-204ENST00000434898 1737 ntBASIC14.28□□□□□ -0.12
MRPL54Q6P161 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 SIRPAP1-201ENST00000448467 1770 ntBASIC14.28□□□□□ -0.12
MRPL54Q6P161 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 AC008764.7-201ENST00000593779 1081 ntBASIC14.28□□□□□ -0.12
MRPL54Q6P161 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL54Q6P161 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
MRPL54Q6P161 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.27□□□□□ -0.12
MRPL54Q6P161 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRPL54Q6P161 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRPL54Q6P161 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.27□□□□□ -0.12
MRPL54Q6P161 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRPL54Q6P161 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MRPL54Q6P161 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
MRPL54Q6P161 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MRPL54Q6P161 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.27□□□□□ -0.12
MRPL54Q6P161 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRPL54Q6P161 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.27□□□□□ -0.12
MRPL54Q6P161 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRPL54Q6P161 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRPL54Q6P161 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
MRPL54Q6P161 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.27□□□□□ -0.12
MRPL54Q6P161 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRPL54Q6P161 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL54Q6P161 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL54Q6P161 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL54Q6P161 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.27□□□□□ -0.13
MRPL54Q6P161 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL54Q6P161 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.27□□□□□ -0.13
MRPL54Q6P161 DUX4L2-201ENST00000561772 1275 ntBASIC14.27□□□□□ -0.13
MRPL54Q6P161 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.27□□□□□ -0.13
MRPL54Q6P161 TPRG1LP1-201ENST00000598702 760 ntBASIC14.27□□□□□ -0.13
MRPL54Q6P161 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC14.27□□□□□ -0.13
MRPL54Q6P161 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
MRPL54Q6P161 DUX4L6-201ENST00000626483 1275 ntBASIC14.27□□□□□ -0.13
MRPL54Q6P161 DUX4L1-201ENST00000627662 1275 ntBASIC14.27□□□□□ -0.13
MRPL54Q6P161 DUX4L8-201ENST00000629013 1275 ntBASIC14.27□□□□□ -0.13
MRPL54Q6P161 DUX4L3-201ENST00000630187 1275 ntBASIC14.27□□□□□ -0.13
MRPL54Q6P161 DUX4L7-201ENST00000630678 1275 ntBASIC14.27□□□□□ -0.13
MRPL54Q6P161 DUX4L5-201ENST00000630834 1275 ntBASIC14.27□□□□□ -0.13
MRPL54Q6P161 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL54Q6P161 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL54Q6P161 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL54Q6P161 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL54Q6P161 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL54Q6P161 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
MRPL54Q6P161 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.27□□□□□ -0.13
MRPL54Q6P161 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL54Q6P161 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
MRPL54Q6P161 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
MRPL54Q6P161 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MRPL54Q6P161 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.26□□□□□ -0.13
MRPL54Q6P161 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MRPL54Q6P161 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MRPL54Q6P161 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.26□□□□□ -0.13
MRPL54Q6P161 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.26□□□□□ -0.13
MRPL54Q6P161 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.26□□□□□ -0.13
MRPL54Q6P161 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
MRPL54Q6P161 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MRPL54Q6P161 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MRPL54Q6P161 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MRPL54Q6P161 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MRPL54Q6P161 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MRPL54Q6P161 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms