Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRK2Q5S007 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRRK2Q5S007 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
LRRK2Q5S007 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRK2Q5S007 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRK2Q5S007 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRK2Q5S007 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRK2Q5S007 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LRRK2Q5S007 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRK2Q5S007 RNA5SP415-201ENST00000517246 115 ntBASIC16.38■□□□□ 0.21
LRRK2Q5S007 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
LRRK2Q5S007 MIR3180-5-201ENST00000583743 153 ntBASIC16.38■□□□□ 0.21
LRRK2Q5S007 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRK2Q5S007 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRK2Q5S007 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRK2Q5S007 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRK2Q5S007 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LRRK2Q5S007 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRK2Q5S007 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRK2Q5S007 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.37■□□□□ 0.21
LRRK2Q5S007 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.37■□□□□ 0.21
LRRK2Q5S007 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRK2Q5S007 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRK2Q5S007 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.37■□□□□ 0.21
LRRK2Q5S007 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRK2Q5S007 HOXB1-202ENST00000577092 1414 ntBASIC16.37■□□□□ 0.21
LRRK2Q5S007 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRK2Q5S007 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRK2Q5S007 AP001271.2-201ENST00000624018 1556 ntBASIC16.37■□□□□ 0.21
LRRK2Q5S007 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRK2Q5S007 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRK2Q5S007 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRK2Q5S007 AC132008.2-207ENST00000454517 770 ntBASIC16.37■□□□□ 0.21
LRRK2Q5S007 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.37■□□□□ 0.21
LRRK2Q5S007 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRK2Q5S007 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRK2Q5S007 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRK2Q5S007 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRK2Q5S007 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRK2Q5S007 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
LRRK2Q5S007 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.36■□□□□ 0.21
LRRK2Q5S007 AC040169.1-201ENST00000565382 521 ntBASIC16.36■□□□□ 0.21
LRRK2Q5S007 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRK2Q5S007 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRK2Q5S007 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRK2Q5S007 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRK2Q5S007 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRK2Q5S007 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRK2Q5S007 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRK2Q5S007 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRK2Q5S007 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRK2Q5S007 MCCD1P1-208ENST00000445732 328 ntBASIC16.36■□□□□ 0.21
LRRK2Q5S007 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.36■□□□□ 0.21
LRRK2Q5S007 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRK2Q5S007 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRK2Q5S007 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRK2Q5S007 AC010240.3-201ENST00000607688 395 ntBASIC16.36■□□□□ 0.21
LRRK2Q5S007 AC124864.1-201ENST00000623408 392 ntBASIC16.36■□□□□ 0.21
LRRK2Q5S007 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRK2Q5S007 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRK2Q5S007 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRK2Q5S007 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRK2Q5S007 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRK2Q5S007 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRK2Q5S007 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRK2Q5S007 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRK2Q5S007 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.35■□□□□ 0.21
LRRK2Q5S007 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRK2Q5S007 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRK2Q5S007 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRK2Q5S007 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.35■□□□□ 0.21
LRRK2Q5S007 AC023274.1-201ENST00000418278 595 ntBASIC16.35■□□□□ 0.21
LRRK2Q5S007 POM121L3P-201ENST00000419331 1163 ntBASIC16.35■□□□□ 0.21
LRRK2Q5S007 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRK2Q5S007 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRK2Q5S007 MIR5100-201ENST00000579544 119 ntBASIC16.35■□□□□ 0.21
LRRK2Q5S007 AC008608.2-201ENST00000606089 416 ntBASIC16.35■□□□□ 0.21
LRRK2Q5S007 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRK2Q5S007 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRK2Q5S007 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRRK2Q5S007 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRK2Q5S007 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRK2Q5S007 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRK2Q5S007 AC112482.1-201ENST00000492080 688 ntBASIC16.35■□□□□ 0.21
LRRK2Q5S007 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRK2Q5S007 MTDHP5-201ENST00000598980 586 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms