Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERCC6LQ2NKX8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.02■□□□□ 0.79
ERCC6LQ2NKX8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.02■□□□□ 0.79
ERCC6LQ2NKX8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ERCC6LQ2NKX8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
ERCC6LQ2NKX8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
ERCC6LQ2NKX8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ERCC6LQ2NKX8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
ERCC6LQ2NKX8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.02■□□□□ 0.79
ERCC6LQ2NKX8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.01■□□□□ 0.79
ERCC6LQ2NKX8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ERCC6LQ2NKX8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ERCC6LQ2NKX8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ERCC6LQ2NKX8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC6LQ2NKX8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.98■□□□□ 0.79
ERCC6LQ2NKX8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.98■□□□□ 0.79
ERCC6LQ2NKX8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.98■□□□□ 0.79
ERCC6LQ2NKX8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC6LQ2NKX8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC6LQ2NKX8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC6LQ2NKX8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC6LQ2NKX8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms