Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 TMEM41B-201ENST00000299596 1443 ntTSL 1 (best)13.25□□□□□ -0.298e-7■■□□□ 11.7
SRSF1Q07955 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.58e-7■■□□□ 11.7
SRSF1Q07955 TMEM41B-202ENST00000524543 3848 ntTSL 29.27□□□□□ -0.938e-7■■□□□ 11.7
SRSF1Q07955 TJAP1-214ENST00000490050 942 ntTSL 1 (best)13.65□□□□□ -0.222e-6■■□□□ 11.7
SRSF1Q07955 TJAP1-210ENST00000454762 3268 ntTSL 1 (best)7.98□□□□□ -1.132e-6■■□□□ 11.7
SRSF1Q07955 KLHL24-203ENST00000437402 563 ntTSL 520.86■□□□□ 0.933e-9■■□□□ 11.7
SRSF1Q07955 KLHL24-212ENST00000481126 389 ntTSL 219.56■□□□□ 0.723e-9■■□□□ 11.7
SRSF1Q07955 KLHL24-213ENST00000482138 588 ntTSL 419.56■□□□□ 0.723e-9■■□□□ 11.7
SRSF1Q07955 KLHL24-215ENST00000493074 627 ntTSL 419.56■□□□□ 0.723e-9■■□□□ 11.7
SRSF1Q07955 KLHL24-204ENST00000454495 603 ntTSL 319.47■□□□□ 0.713e-9■■□□□ 11.7
SRSF1Q07955 KLHL24-202ENST00000427201 562 ntTSL 418.12■□□□□ 0.493e-9■■□□□ 11.7
SRSF1Q07955 KLHL24-206ENST00000461813 587 ntTSL 418.12■□□□□ 0.493e-9■■□□□ 11.7
SRSF1Q07955 KLHL24-209ENST00000473045 542 ntTSL 417.91■□□□□ 0.463e-9■■□□□ 11.7
SRSF1Q07955 KLHL24-208ENST00000468101 574 ntTSL 417.27■□□□□ 0.363e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-218ENST00000476727 1205 ntTSL 517.22■□□□□ 0.353e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-217ENST00000476541 513 ntTSL 316.56■□□□□ 0.243e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.143e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.13e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.093e-9■■□□□ 11.7
SRSF1Q07955 KLHL24-210ENST00000475827 545 ntTSL 414.71□□□□□ -0.053e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.13e-9■■□□□ 11.7
SRSF1Q07955 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.253e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-219ENST00000485001 596 ntTSL 311.36□□□□□ -0.593e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-213ENST00000471839 928 ntAPPRIS ALT2 TSL 210.64□□□□□ -0.713e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.813e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.883e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.923e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC9.28□□□□□ -0.923e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-207ENST00000393608 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -13e-9■■□□□ 11.7
SRSF1Q07955 KLHL24-205ENST00000454652 7380 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.013e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-208ENST00000415526 2508 ntAPPRIS ALT2 TSL 1 (best)8.19□□□□□ -1.13e-9■■□□□ 11.7
SRSF1Q07955 CIZ1-212ENST00000471773 717 ntTSL 27.69□□□□□ -1.183e-9■■□□□ 11.7
SRSF1Q07955 SRRM2-220ENST00000574593 1440 ntTSL 314.83□□□□□ -0.042e-10■■□□□ 11.7
SRSF1Q07955 C16orf58-203ENST00000541442 1056 ntTSL 219.56■□□□□ 0.728e-7■■□□□ 11.7
SRSF1Q07955 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17■□□□□ 0.318e-7■■□□□ 11.7
SRSF1Q07955 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.058e-7■■□□□ 11.7
SRSF1Q07955 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.388e-7■■□□□ 11.7
SRSF1Q07955 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.398e-7■■□□□ 11.7
SRSF1Q07955 C16orf58-210ENST00000568491 2422 ntTSL 212.39□□□□□ -0.438e-7■■□□□ 11.7
SRSF1Q07955 C16orf58-208ENST00000567673 766 ntTSL 211.4□□□□□ -0.588e-7■■□□□ 11.7
SRSF1Q07955 GUK1-234ENST00000492871 1065 ntTSL 324.25■■□□□ 1.471e-7■■□□□ 11.7
SRSF1Q07955 GUK1-215ENST00000462807 628 ntTSL 224.24■■□□□ 1.471e-7■■□□□ 11.7
SRSF1Q07955 GUK1-235ENST00000493138 694 ntTSL 323.94■■□□□ 1.421e-7■■□□□ 11.7
SRSF1Q07955 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.29■■□□□ 1.321e-7■■□□□ 11.7
SRSF1Q07955 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.99■■□□□ 1.111e-7■■□□□ 11.7
SRSF1Q07955 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.78■□□□□ 0.921e-7■■□□□ 11.7
SRSF1Q07955 GUK1-213ENST00000453943 656 ntTSL 1 (best)20.58■□□□□ 0.891e-7■■□□□ 11.7
SRSF1Q07955 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.781e-7■■□□□ 11.7
SRSF1Q07955 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.73■□□□□ 0.751e-7■■□□□ 11.7
SRSF1Q07955 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.12■□□□□ 0.491e-7■■□□□ 11.7
SRSF1Q07955 GUK1-230ENST00000485838 774 ntTSL 318.03■□□□□ 0.481e-7■■□□□ 11.7
SRSF1Q07955 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.251e-7■■□□□ 11.7
SRSF1Q07955 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.92□□□□□ -0.181e-7■■□□□ 11.7
SRSF1Q07955 GUK1-238ENST00000498092 865 ntTSL 513.87□□□□□ -0.191e-7■■□□□ 11.7
SRSF1Q07955 GUK1-212ENST00000435153 865 ntTSL 312.18□□□□□ -0.461e-7■■□□□ 11.7
SRSF1Q07955 FAM193B-213ENST00000510429 839 ntTSL 315.2■□□□□ 0.025e-8■■□□□ 11.7
SRSF1Q07955 PKD1-218ENST00000485120 696 ntTSL 318.07■□□□□ 0.486e-10■■□□□ 11.7
SRSF1Q07955 PKD1-233ENST00000567355 575 ntTSL 415.69■□□□□ 0.16e-10■■□□□ 11.7
SRSF1Q07955 PKD1-226ENST00000562425 608 ntTSL 315.44■□□□□ 0.066e-10■■□□□ 11.7
SRSF1Q07955 PKD1-220ENST00000487932 6464 ntTSL 512.82□□□□□ -0.366e-10■■□□□ 11.7
SRSF1Q07955 FAM118A-207ENST00000459849 695 ntTSL 311.78□□□□□ -0.527e-7■■□□□ 11.7
SRSF1Q07955 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.657e-7■■□□□ 11.7
SRSF1Q07955 CALCOCO1-208ENST00000547988 1277 ntTSL 1 (best)10.22□□□□□ -0.777e-7■■□□□ 11.7
SRSF1Q07955 CALCOCO1-217ENST00000549935 2112 ntTSL 510.01□□□□□ -0.817e-7■■□□□ 11.7
SRSF1Q07955 FAM118A-215ENST00000487732 677 ntTSL 39.62□□□□□ -0.877e-7■■□□□ 11.7
SRSF1Q07955 FAM118A-210ENST00000476754 675 ntTSL 39.6□□□□□ -0.877e-7■■□□□ 11.7
SRSF1Q07955 FAM118A-209ENST00000476478 354 ntTSL 39.17□□□□□ -0.947e-7■■□□□ 11.7
SRSF1Q07955 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC9.03□□□□□ -0.967e-7■■□□□ 11.7
SRSF1Q07955 CALCOCO1-202ENST00000430117 2706 ntTSL 5 BASIC8.74□□□□□ -1.017e-7■■□□□ 11.7
SRSF1Q07955 CALCOCO1-210ENST00000548263 3888 ntTSL 1 (best) BASIC7.49□□□□□ -1.217e-7■■□□□ 11.7
SRSF1Q07955 ELP2-216ENST00000541190 583 ntTSL 211.59□□□□□ -0.558e-7■■□□□ 11.7
SRSF1Q07955 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.575e-7■■□□□ 11.7
SRSF1Q07955 CSNK1G2-208ENST00000591002 617 ntTSL 319.31■□□□□ 0.685e-6■■□□□ 11.7
SRSF1Q07955 CSNK1G2-205ENST00000589385 896 ntTSL 517.83■□□□□ 0.445e-6■■□□□ 11.7
SRSF1Q07955 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.185e-6■■□□□ 11.7
SRSF1Q07955 CSNK1G2-203ENST00000585959 704 ntTSL 215.1■□□□□ 0.015e-6■■□□□ 11.7
SRSF1Q07955 CSNK1G2-207ENST00000590106 1006 ntTSL 513.71□□□□□ -0.215e-6■■□□□ 11.7
SRSF1Q07955 CBX3-204ENST00000456948 1068 ntTSL 521.47■■□□□ 1.034e-9■■□□□ 11.7
SRSF1Q07955 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.17□□□□□ -0.144e-9■■□□□ 11.7
SRSF1Q07955 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.444e-9■■□□□ 11.7
SRSF1Q07955 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.544e-9■■□□□ 11.7
SRSF1Q07955 MVD-212ENST00000565842 285 ntTSL 323■■□□□ 1.272e-11■■□□□ 11.7
SRSF1Q07955 MVD-204ENST00000562741 217 ntTSL 220.97■□□□□ 0.952e-11■■□□□ 11.7
SRSF1Q07955 MVD-207ENST00000563463 543 ntTSL 316.2■□□□□ 0.182e-11■■□□□ 11.7
SRSF1Q07955 RAD9A-210ENST00000621995 912 ntTSL 325.58■■□□□ 1.692e-6■■□□□ 11.7
SRSF1Q07955 MAP3K2-202ENST00000409179 689 ntTSL 524.95■■□□□ 1.582e-6■■□□□ 11.7
SRSF1Q07955 NBPF15-207ENST00000584575 706 ntTSL 322.81■■□□□ 1.242e-6■■□□□ 11.7
SRSF1Q07955 AC132008.2-202ENST00000414207 1286 ntTSL 519.48■□□□□ 0.712e-6■■□□□ 11.7
SRSF1Q07955 NBPF15-205ENST00000579734 908 ntTSL 518.94■□□□□ 0.622e-6■■□□□ 11.7
SRSF1Q07955 NBPF15-201ENST00000478419 709 ntTSL 318.94■□□□□ 0.622e-6■■□□□ 11.7
SRSF1Q07955 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.25■□□□□ 0.192e-6■■□□□ 11.7
SRSF1Q07955 ACOX2-208ENST00000474098 708 ntTSL 314.74□□□□□ -0.052e-6■■□□□ 11.7
SRSF1Q07955 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.092e-6■■□□□ 11.7
SRSF1Q07955 BSDC1-207ENST00000463967 616 ntTSL 313.42□□□□□ -0.262e-6■■□□□ 11.7
SRSF1Q07955 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.282e-6■■□□□ 11.7
SRSF1Q07955 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.312e-6■■□□□ 11.7
SRSF1Q07955 ACOX2-213ENST00000492530 578 ntTSL 312.79□□□□□ -0.362e-6■■□□□ 11.7
SRSF1Q07955 FANCA-214ENST00000563767 578 ntTSL 312.53□□□□□ -0.47e-7■■□□□ 11.7
SRSF1Q07955 ACAA1-213ENST00000465181 656 ntTSL 312.46□□□□□ -0.412e-6■■□□□ 11.7
SRSF1Q07955 NBPF15-208ENST00000584793 3084 ntTSL 511.92□□□□□ -0.52e-6■■□□□ 11.7
Retrieved 100 of 14,836 protein–RNA pairs in 147.7 ms