Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SNRPFP62306 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRPFP62306 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.54■□□□□ 0.88
SNRPFP62306 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.54■□□□□ 0.88
SNRPFP62306 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRPFP62306 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRPFP62306 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SNRPFP62306 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPFP62306 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPFP62306 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SNRPFP62306 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SNRPFP62306 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPFP62306 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SNRPFP62306 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPFP62306 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
SNRPFP62306 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SNRPFP62306 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.53■□□□□ 0.88
SNRPFP62306 AC007663.1-201ENST00000438948 1240 ntBASIC20.53■□□□□ 0.88
SNRPFP62306 AC010947.1-201ENST00000623454 693 ntBASIC20.53■□□□□ 0.88
SNRPFP62306 GPAT2P1-201ENST00000444924 1672 ntBASIC20.53■□□□□ 0.88
SNRPFP62306 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SNRPFP62306 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPFP62306 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
SNRPFP62306 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPFP62306 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPFP62306 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SNRPFP62306 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNRPFP62306 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SNRPFP62306 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNRPFP62306 AC093503.3-201ENST00000624917 2352 ntBASIC20.52■□□□□ 0.88
SNRPFP62306 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNRPFP62306 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNRPFP62306 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SNRPFP62306 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.52■□□□□ 0.88
SNRPFP62306 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNRPFP62306 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNRPFP62306 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.52■□□□□ 0.88
SNRPFP62306 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.52■□□□□ 0.88
SNRPFP62306 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.52■□□□□ 0.88
SNRPFP62306 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.52■□□□□ 0.88
SNRPFP62306 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.52■□□□□ 0.88
SNRPFP62306 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.52■□□□□ 0.88
SNRPFP62306 AP003041.3-201ENST00000527151 707 ntBASIC20.52■□□□□ 0.88
SNRPFP62306 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.52■□□□□ 0.88
SNRPFP62306 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.52■□□□□ 0.88
SNRPFP62306 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNRPFP62306 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.52■□□□□ 0.88
SNRPFP62306 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNRPFP62306 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
SNRPFP62306 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
SNRPFP62306 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPFP62306 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPFP62306 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPFP62306 CYP2D8P-201ENST00000433633 1490 ntBASIC20.51■□□□□ 0.87
SNRPFP62306 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.51■□□□□ 0.87
SNRPFP62306 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPFP62306 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.51■□□□□ 0.87
SNRPFP62306 KRT18P41-201ENST00000518924 1277 ntBASIC20.51■□□□□ 0.87
SNRPFP62306 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPFP62306 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.51■□□□□ 0.87
SNRPFP62306 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPFP62306 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.51■□□□□ 0.87
SNRPFP62306 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPFP62306 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.51■□□□□ 0.87
SNRPFP62306 MYC-208ENST00000641036 567 ntBASIC20.51■□□□□ 0.87
SNRPFP62306 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPFP62306 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPFP62306 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.51■□□□□ 0.87
SNRPFP62306 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPFP62306 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.51■□□□□ 0.87
SNRPFP62306 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPFP62306 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPFP62306 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPFP62306 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SNRPFP62306 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SNRPFP62306 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SNRPFP62306 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.51■□□□□ 0.87
SNRPFP62306 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SNRPFP62306 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.51■□□□□ 0.87
SNRPFP62306 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNRPFP62306 AC087289.5-201ENST00000586076 3175 ntBASIC20.5■□□□□ 0.87
SNRPFP62306 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.5■□□□□ 0.87
SNRPFP62306 MIR564-202ENST00000385049 94 ntBASIC20.5■□□□□ 0.87
SNRPFP62306 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.5■□□□□ 0.87
SNRPFP62306 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.5■□□□□ 0.87
SNRPFP62306 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.5■□□□□ 0.87
SNRPFP62306 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.5■□□□□ 0.87
SNRPFP62306 WWOX-216ENST00000569818 525 ntBASIC20.5■□□□□ 0.87
SNRPFP62306 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNRPFP62306 KRT8P9-201ENST00000558927 1449 ntBASIC20.5■□□□□ 0.87
SNRPFP62306 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.5■□□□□ 0.87
SNRPFP62306 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SNRPFP62306 ANO7L1-203ENST00000602586 1720 ntBASIC20.5■□□□□ 0.87
SNRPFP62306 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNRPFP62306 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SNRPFP62306 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
SNRPFP62306 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNRPFP62306 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
SNRPFP62306 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.49■□□□□ 0.87
SNRPFP62306 AL357033.4-201ENST00000617703 1807 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms