Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S2P59780 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S2P59780 SDHAP1-207ENST00000440850 2000 ntBASIC16.24■□□□□ 0.19
AP3S2P59780 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AP3S2P59780 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AP3S2P59780 AC012313.1-201ENST00000593393 3059 ntBASIC16.24■□□□□ 0.19
AP3S2P59780 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S2P59780 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
AP3S2P59780 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.24■□□□□ 0.19
AP3S2P59780 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S2P59780 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S2P59780 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
AP3S2P59780 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
AP3S2P59780 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 AC104417.2-201ENST00000562989 1793 ntBASIC16.23■□□□□ 0.19
AP3S2P59780 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
AP3S2P59780 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
AP3S2P59780 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
AP3S2P59780 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
AP3S2P59780 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
AP3S2P59780 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.23■□□□□ 0.19
AP3S2P59780 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
AP3S2P59780 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3S2P59780 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
AP3S2P59780 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
AP3S2P59780 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
AP3S2P59780 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
AP3S2P59780 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
AP3S2P59780 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.23■□□□□ 0.19
AP3S2P59780 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP3S2P59780 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S2P59780 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S2P59780 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S2P59780 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S2P59780 AC134043.2-201ENST00000624206 2238 ntBASIC16.22■□□□□ 0.19
AP3S2P59780 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S2P59780 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S2P59780 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
AP3S2P59780 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
AP3S2P59780 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
AP3S2P59780 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S2P59780 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S2P59780 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.22■□□□□ 0.19
AP3S2P59780 MIR939-201ENST00000401314 82 ntBASIC16.22■□□□□ 0.19
AP3S2P59780 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S2P59780 LINC02228-203ENST00000641970 1355 ntBASIC16.22■□□□□ 0.19
AP3S2P59780 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
AP3S2P59780 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.22■□□□□ 0.19
AP3S2P59780 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP3S2P59780 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.21■□□□□ 0.19
AP3S2P59780 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
AP3S2P59780 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
AP3S2P59780 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.21■□□□□ 0.19
AP3S2P59780 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.21■□□□□ 0.19
AP3S2P59780 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.21■□□□□ 0.19
AP3S2P59780 PKD1P5-201ENST00000532415 10291 ntBASIC16.21■□□□□ 0.19
AP3S2P59780 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.21■□□□□ 0.19
AP3S2P59780 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
AP3S2P59780 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.21■□□□□ 0.19
AP3S2P59780 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.21■□□□□ 0.19
AP3S2P59780 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.21■□□□□ 0.19
AP3S2P59780 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.21■□□□□ 0.19
AP3S2P59780 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S2P59780 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms