Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN12P56749 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN12P56749 AP006587.1-201ENST00000534129 1502 ntBASIC16.45■□□□□ 0.22
CLDN12P56749 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
CLDN12P56749 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN12P56749 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CLDN12P56749 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN12P56749 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN12P56749 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CLDN12P56749 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN12P56749 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLDN12P56749 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CLDN12P56749 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN12P56749 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN12P56749 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN12P56749 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN12P56749 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN12P56749 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN12P56749 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN12P56749 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN12P56749 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CLDN12P56749 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CLDN12P56749 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN12P56749 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN12P56749 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLDN12P56749 AC005829.2-201ENST00000571422 1056 ntBASIC16.44■□□□□ 0.22
CLDN12P56749 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CLDN12P56749 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN12P56749 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN12P56749 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN12P56749 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN12P56749 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN12P56749 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN12P56749 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN12P56749 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN12P56749 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN12P56749 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN12P56749 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN12P56749 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CLDN12P56749 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN12P56749 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CLDN12P56749 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CLDN12P56749 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN12P56749 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN12P56749 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN12P56749 RPS2P52-201ENST00000469610 820 ntBASIC16.43■□□□□ 0.22
CLDN12P56749 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN12P56749 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN12P56749 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN12P56749 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLDN12P56749 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN12P56749 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLDN12P56749 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN12P56749 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CLDN12P56749 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CLDN12P56749 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN12P56749 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN12P56749 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN12P56749 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CLDN12P56749 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 YBX1P10-201ENST00000444752 975 ntBASIC16.42■□□□□ 0.22
CLDN12P56749 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN12P56749 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.42■□□□□ 0.22
CLDN12P56749 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
CLDN12P56749 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN12P56749 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN12P56749 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN12P56749 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CLDN12P56749 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN12P56749 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms