Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
GFRA1P56159 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
GFRA1P56159 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA1P56159 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA1P56159 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.93■□□□□ 0.3
GFRA1P56159 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.93■□□□□ 0.3
GFRA1P56159 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GFRA1P56159 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.93■□□□□ 0.3
GFRA1P56159 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
GFRA1P56159 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.93■□□□□ 0.3
GFRA1P56159 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA1P56159 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA1P56159 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA1P56159 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA1P56159 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.92■□□□□ 0.3
GFRA1P56159 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA1P56159 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA1P56159 FAM8A6P-201ENST00000407496 1135 ntBASIC16.92■□□□□ 0.3
GFRA1P56159 KRT18P35-201ENST00000510488 1269 ntBASIC16.92■□□□□ 0.3
GFRA1P56159 AC022616.7-201ENST00000525383 220 ntBASIC16.92■□□□□ 0.3
GFRA1P56159 AL441883.1-201ENST00000566170 1045 ntBASIC16.92■□□□□ 0.3
GFRA1P56159 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA1P56159 AL445228.2-201ENST00000605589 952 ntBASIC16.92■□□□□ 0.3
GFRA1P56159 AC140113.3-201ENST00000605663 199 ntBASIC16.92■□□□□ 0.3
GFRA1P56159 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA1P56159 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.92■□□□□ 0.3
GFRA1P56159 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA1P56159 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA1P56159 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA1P56159 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.92■□□□□ 0.3
GFRA1P56159 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA1P56159 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GFRA1P56159 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.91■□□□□ 0.3
GFRA1P56159 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.91■□□□□ 0.3
GFRA1P56159 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GFRA1P56159 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA1P56159 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA1P56159 AC008556.1-201ENST00000610908 2040 ntBASIC16.91■□□□□ 0.3
GFRA1P56159 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.91■□□□□ 0.3
GFRA1P56159 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.91■□□□□ 0.3
GFRA1P56159 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA1P56159 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA1P56159 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA1P56159 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.91■□□□□ 0.3
GFRA1P56159 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.91■□□□□ 0.3
GFRA1P56159 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.91■□□□□ 0.3
GFRA1P56159 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.91■□□□□ 0.3
GFRA1P56159 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.91■□□□□ 0.3
GFRA1P56159 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.91■□□□□ 0.3
GFRA1P56159 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA1P56159 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA1P56159 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA1P56159 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA1P56159 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA1P56159 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA1P56159 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GFRA1P56159 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GFRA1P56159 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA1P56159 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
GFRA1P56159 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
GFRA1P56159 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA1P56159 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA1P56159 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.9■□□□□ 0.3
GFRA1P56159 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA1P56159 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA1P56159 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.9■□□□□ 0.3
GFRA1P56159 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA1P56159 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA1P56159 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA1P56159 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.9■□□□□ 0.3
GFRA1P56159 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.9■□□□□ 0.3
GFRA1P56159 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA1P56159 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.9■□□□□ 0.3
GFRA1P56159 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.9■□□□□ 0.3
GFRA1P56159 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.9■□□□□ 0.3
GFRA1P56159 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA1P56159 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.9■□□□□ 0.3
GFRA1P56159 LINC01238-205ENST00000567549 1107 ntBASIC16.9■□□□□ 0.3
GFRA1P56159 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.9■□□□□ 0.3
GFRA1P56159 NTF6B-201ENST00000591913 560 ntBASIC16.9■□□□□ 0.3
GFRA1P56159 AC068587.9-201ENST00000641814 219 ntBASIC16.9■□□□□ 0.3
GFRA1P56159 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.9■□□□□ 0.3
GFRA1P56159 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA1P56159 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GFRA1P56159 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA1P56159 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA1P56159 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.9■□□□□ 0.3
GFRA1P56159 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA1P56159 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
GFRA1P56159 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA1P56159 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
GFRA1P56159 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
GFRA1P56159 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
GFRA1P56159 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.89■□□□□ 0.3
GFRA1P56159 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GFRA1P56159 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA1P56159 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA1P56159 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA1P56159 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA1P56159 AL049812.1-201ENST00000432563 2267 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms