Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC142381.4-202ENST00000563973 229 ntBASIC18.68■□□□□ 0.58
CDKN2DP55273 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.68■□□□□ 0.58
CDKN2DP55273 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.68■□□□□ 0.58
CDKN2DP55273 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.68■□□□□ 0.58
CDKN2DP55273 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.68■□□□□ 0.58
CDKN2DP55273 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.68■□□□□ 0.58
CDKN2DP55273 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKN2DP55273 HEIH-201ENST00000623091 1652 ntBASIC18.68■□□□□ 0.58
CDKN2DP55273 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKN2DP55273 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKN2DP55273 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKN2DP55273 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDKN2DP55273 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKN2DP55273 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKN2DP55273 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDKN2DP55273 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKN2DP55273 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKN2DP55273 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKN2DP55273 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKN2DP55273 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.67■□□□□ 0.58
CDKN2DP55273 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.67■□□□□ 0.58
CDKN2DP55273 AC090164.3-201ENST00000610780 2143 ntBASIC18.67■□□□□ 0.58
CDKN2DP55273 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKN2DP55273 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDKN2DP55273 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.67■□□□□ 0.58
CDKN2DP55273 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKN2DP55273 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKN2DP55273 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKN2DP55273 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.67■□□□□ 0.58
CDKN2DP55273 B3GAT3P1-201ENST00000471720 806 ntBASIC18.67■□□□□ 0.58
CDKN2DP55273 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKN2DP55273 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKN2DP55273 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDKN2DP55273 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKN2DP55273 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.67■□□□□ 0.58
CDKN2DP55273 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKN2DP55273 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKN2DP55273 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKN2DP55273 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDKN2DP55273 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKN2DP55273 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 MTMR9LP-203ENST00000426597 1545 ntBASIC18.66■□□□□ 0.58
CDKN2DP55273 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDKN2DP55273 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDKN2DP55273 GCSHP5-201ENST00000443090 522 ntBASIC18.66■□□□□ 0.58
CDKN2DP55273 AL158047.1-201ENST00000445918 881 ntBASIC18.66■□□□□ 0.58
CDKN2DP55273 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
CDKN2DP55273 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDKN2DP55273 CKBP1-201ENST00000565489 1086 ntBASIC18.66■□□□□ 0.58
CDKN2DP55273 MIR6786-201ENST00000616843 113 ntBASIC18.66■□□□□ 0.58
CDKN2DP55273 AC068587.9-201ENST00000641814 219 ntBASIC18.66■□□□□ 0.58
CDKN2DP55273 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKN2DP55273 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
CDKN2DP55273 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.66■□□□□ 0.58
CDKN2DP55273 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKN2DP55273 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.66■□□□□ 0.58
CDKN2DP55273 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CDKN2DP55273 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKN2DP55273 KRT8P3-201ENST00000519669 1449 ntBASIC18.66■□□□□ 0.58
CDKN2DP55273 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.65■□□□□ 0.58
CDKN2DP55273 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKN2DP55273 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKN2DP55273 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKN2DP55273 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.65■□□□□ 0.58
CDKN2DP55273 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKN2DP55273 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKN2DP55273 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CDKN2DP55273 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKN2DP55273 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDKN2DP55273 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.65■□□□□ 0.58
CDKN2DP55273 CD177P1-201ENST00000606252 935 ntBASIC18.65■□□□□ 0.58
CDKN2DP55273 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKN2DP55273 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKN2DP55273 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKN2DP55273 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKN2DP55273 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKN2DP55273 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKN2DP55273 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKN2DP55273 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CDKN2DP55273 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.65■□□□□ 0.58
CDKN2DP55273 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKN2DP55273 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKN2DP55273 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CDKN2DP55273 KRT8P32-201ENST00000512863 1461 ntBASIC18.65■□□□□ 0.58
CDKN2DP55273 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDKN2DP55273 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDKN2DP55273 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms