Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
LIMK1P53667 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
LIMK1P53667 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK1P53667 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.66■□□□□ 0.58
LIMK1P53667 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK1P53667 KRT18P31-201ENST00000506277 1292 ntBASIC18.66■□□□□ 0.58
LIMK1P53667 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.66■□□□□ 0.58
LIMK1P53667 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LIMK1P53667 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.66■□□□□ 0.58
LIMK1P53667 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.66■□□□□ 0.58
LIMK1P53667 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK1P53667 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK1P53667 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.66■□□□□ 0.58
LIMK1P53667 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK1P53667 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.66■□□□□ 0.58
LIMK1P53667 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK1P53667 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.66■□□□□ 0.58
LIMK1P53667 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK1P53667 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.66■□□□□ 0.58
LIMK1P53667 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIMK1P53667 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LIMK1P53667 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.65■□□□□ 0.58
LIMK1P53667 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.65■□□□□ 0.58
LIMK1P53667 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.65■□□□□ 0.58
LIMK1P53667 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.65■□□□□ 0.58
LIMK1P53667 AC012615.1-201ENST00000565797 1299 ntBASIC18.65■□□□□ 0.58
LIMK1P53667 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.65■□□□□ 0.58
LIMK1P53667 AL121912.1-201ENST00000603683 238 ntBASIC18.65■□□□□ 0.58
LIMK1P53667 AC120114.3-201ENST00000611923 658 ntBASIC18.65■□□□□ 0.58
LIMK1P53667 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.65■□□□□ 0.58
LIMK1P53667 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.65■□□□□ 0.58
LIMK1P53667 AC112907.3-201ENST00000577781 2400 ntBASIC18.65■□□□□ 0.58
LIMK1P53667 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LIMK1P53667 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.65■□□□□ 0.58
LIMK1P53667 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.65■□□□□ 0.58
LIMK1P53667 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LIMK1P53667 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
LIMK1P53667 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
LIMK1P53667 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LIMK1P53667 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LIMK1P53667 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.64■□□□□ 0.58
LIMK1P53667 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
LIMK1P53667 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.64■□□□□ 0.58
LIMK1P53667 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.64■□□□□ 0.57
LIMK1P53667 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.64■□□□□ 0.57
LIMK1P53667 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.64■□□□□ 0.57
LIMK1P53667 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.64■□□□□ 0.57
LIMK1P53667 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.64■□□□□ 0.57
LIMK1P53667 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.64■□□□□ 0.57
LIMK1P53667 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.64■□□□□ 0.57
LIMK1P53667 TPSP2-201ENST00000561760 610 ntBASIC18.64■□□□□ 0.57
LIMK1P53667 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LIMK1P53667 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK1P53667 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK1P53667 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LIMK1P53667 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LIMK1P53667 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LIMK1P53667 AL512408.1-201ENST00000569378 2000 ntBASIC18.63■□□□□ 0.57
LIMK1P53667 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK1P53667 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK1P53667 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK1P53667 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK1P53667 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK1P53667 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK1P53667 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK1P53667 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.63■□□□□ 0.57
LIMK1P53667 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK1P53667 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.63■□□□□ 0.57
LIMK1P53667 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK1P53667 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK1P53667 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LIMK1P53667 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms