Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX2P50458 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX2P50458 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LHX2P50458 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX2P50458 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LHX2P50458 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LHX2P50458 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LHX2P50458 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX2P50458 ARMC10P1-201ENST00000313754 855 ntBASIC16.87■□□□□ 0.29
LHX2P50458 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX2P50458 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.87■□□□□ 0.29
LHX2P50458 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.87■□□□□ 0.29
LHX2P50458 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LHX2P50458 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX2P50458 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.87■□□□□ 0.29
LHX2P50458 LINC01238-205ENST00000567549 1107 ntBASIC16.87■□□□□ 0.29
LHX2P50458 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.87■□□□□ 0.29
LHX2P50458 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.87■□□□□ 0.29
LHX2P50458 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.87■□□□□ 0.29
LHX2P50458 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LHX2P50458 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX2P50458 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX2P50458 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LHX2P50458 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LHX2P50458 AL161938.1-201ENST00000569833 2180 ntBASIC16.87■□□□□ 0.29
LHX2P50458 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
LHX2P50458 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX2P50458 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
LHX2P50458 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX2P50458 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX2P50458 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
LHX2P50458 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX2P50458 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX2P50458 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX2P50458 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.86■□□□□ 0.29
LHX2P50458 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.86■□□□□ 0.29
LHX2P50458 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX2P50458 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX2P50458 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.86■□□□□ 0.29
LHX2P50458 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX2P50458 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX2P50458 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX2P50458 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
LHX2P50458 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.86■□□□□ 0.29
LHX2P50458 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX2P50458 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX2P50458 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX2P50458 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.86■□□□□ 0.29
LHX2P50458 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LHX2P50458 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LHX2P50458 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX2P50458 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX2P50458 AC008556.1-201ENST00000610908 2040 ntBASIC16.86■□□□□ 0.29
LHX2P50458 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX2P50458 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.85■□□□□ 0.29
LHX2P50458 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX2P50458 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX2P50458 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX2P50458 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.85■□□□□ 0.29
LHX2P50458 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX2P50458 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LHX2P50458 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.85■□□□□ 0.29
LHX2P50458 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
LHX2P50458 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.85■□□□□ 0.29
LHX2P50458 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX2P50458 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.85■□□□□ 0.29
LHX2P50458 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.85■□□□□ 0.29
LHX2P50458 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.85■□□□□ 0.29
LHX2P50458 HOMER2P1-201ENST00000455653 964 ntBASIC16.85■□□□□ 0.29
LHX2P50458 AC092647.4-201ENST00000457211 535 ntBASIC16.85■□□□□ 0.29
LHX2P50458 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.85■□□□□ 0.29
LHX2P50458 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.85■□□□□ 0.29
LHX2P50458 GCSHP2-201ENST00000560971 527 ntBASIC16.85■□□□□ 0.29
LHX2P50458 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.85■□□□□ 0.29
LHX2P50458 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.85■□□□□ 0.29
LHX2P50458 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
LHX2P50458 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LHX2P50458 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX2P50458 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX2P50458 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LHX2P50458 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX2P50458 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LHX2P50458 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LHX2P50458 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX2P50458 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.85■□□□□ 0.29
LHX2P50458 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LHX2P50458 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LHX2P50458 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LHX2P50458 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LHX2P50458 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX2P50458 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.84■□□□□ 0.29
LHX2P50458 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LHX2P50458 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LHX2P50458 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LHX2P50458 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LHX2P50458 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.84■□□□□ 0.29
LHX2P50458 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.84■□□□□ 0.29
LHX2P50458 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.84■□□□□ 0.29
LHX2P50458 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
LHX2P50458 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms