Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.8■□□□□ 0.6
CTSKP43235 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.8■□□□□ 0.6
CTSKP43235 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.8■□□□□ 0.6
CTSKP43235 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTSKP43235 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.8■□□□□ 0.6
CTSKP43235 GCSHP2-201ENST00000560971 527 ntBASIC18.8■□□□□ 0.6
CTSKP43235 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.8■□□□□ 0.6
CTSKP43235 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSKP43235 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.8■□□□□ 0.6
CTSKP43235 AC083849.1-201ENST00000615227 514 ntBASIC18.8■□□□□ 0.6
CTSKP43235 HYMAI.1-201ENST00000620949 238 ntBASIC18.8■□□□□ 0.6
CTSKP43235 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSKP43235 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.8■□□□□ 0.6
CTSKP43235 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSKP43235 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTSKP43235 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
CTSKP43235 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTSKP43235 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSKP43235 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CTSKP43235 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
CTSKP43235 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTSKP43235 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.79■□□□□ 0.6
CTSKP43235 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSKP43235 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTSKP43235 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSKP43235 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTSKP43235 HCG4P8-203ENST00000443049 980 ntBASIC18.79■□□□□ 0.6
CTSKP43235 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTSKP43235 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.79■□□□□ 0.6
CTSKP43235 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.79■□□□□ 0.6
CTSKP43235 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.79■□□□□ 0.6
CTSKP43235 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.79■□□□□ 0.6
CTSKP43235 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.79■□□□□ 0.6
CTSKP43235 AC069148.1-201ENST00000608741 768 ntBASIC18.79■□□□□ 0.6
CTSKP43235 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CTSKP43235 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSKP43235 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.79■□□□□ 0.6
CTSKP43235 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTSKP43235 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTSKP43235 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSKP43235 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CTSKP43235 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CTSKP43235 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSKP43235 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.79■□□□□ 0.6
CTSKP43235 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSKP43235 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTSKP43235 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.78■□□□□ 0.6
CTSKP43235 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSKP43235 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTSKP43235 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.78■□□□□ 0.6
CTSKP43235 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSKP43235 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSKP43235 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSKP43235 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CTSKP43235 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSKP43235 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.78■□□□□ 0.6
CTSKP43235 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.78■□□□□ 0.6
CTSKP43235 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTSKP43235 ZNF444P1-201ENST00000559497 298 ntBASIC18.78■□□□□ 0.6
CTSKP43235 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSKP43235 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
CTSKP43235 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTSKP43235 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
CTSKP43235 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CTSKP43235 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CTSKP43235 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSKP43235 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSKP43235 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSKP43235 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.77■□□□□ 0.6
CTSKP43235 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.77■□□□□ 0.6
CTSKP43235 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CTSKP43235 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.77■□□□□ 0.6
CTSKP43235 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTSKP43235 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTSKP43235 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.77■□□□□ 0.6
CTSKP43235 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTSKP43235 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.77■□□□□ 0.6
CTSKP43235 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.77■□□□□ 0.6
CTSKP43235 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.77■□□□□ 0.6
CTSKP43235 MIR4674-201ENST00000582457 87 ntBASIC18.77■□□□□ 0.6
CTSKP43235 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.77■□□□□ 0.6
CTSKP43235 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTSKP43235 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CTSKP43235 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CTSKP43235 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.76■□□□□ 0.59
CTSKP43235 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.76■□□□□ 0.59
CTSKP43235 AC018445.3-201ENST00000624177 1945 ntBASIC18.76■□□□□ 0.59
CTSKP43235 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CTSKP43235 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.76■□□□□ 0.59
CTSKP43235 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CTSKP43235 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
CTSKP43235 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTSKP43235 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms